Click here to switch to the map view.

The map label for this gene is 108562931

Identifier: 108562931

GI number: 108562931

Start: 529409

End: 530167

Strand: Reverse

Name: 108562931

Synonym: HPAG1_0506

Alternate gene names: NA

Gene position: 530167-529409 (Counterclockwise)

Preceding gene: 108562935

Following gene: 108562930

Centisome position: 33.21

GC content: 34.39

Gene sequence:

>759_bases
ATGTTAGGGAAAAAAAACGAGGAAGTCTTGGTTGATGAAAATTTGGTTGGGGGTGTGATAGCCCTTGATAGATTGGCAAA
ACTCAATAAGGCCAATAGGACTTTCAAAAGGGCTTTTTATCTCTCTATGGCACTCAATGTCGCCGCTGTAACGAGTATTG
TGATGATGATGCCTTTGAAGAAAACGGATATATTTGTTTATGGCATTGATCGATACACAGGAGAATTTAAAATCGTCAAA
CGCTCCGATGCTAGACAAATCGTCAATTCTGAAGCTGTTGTGGATAGTGCAACTTCAAAATTTGTCTCATTGCTGTTTGG
TTATAGCAAAAATTCTTTGAGGGATCGCAAGGATCAACTAATGCAATATTGCGATGTGAGTTTTCAAACCCAAGCAATGA
GAATGTTCAATGAAAATATCAGACAATTCGTAGATAAAGTCCGAGCAGAAGCTATCATTAGTTCTAACATACAAAGAGAA
AAAGTCAAAAATAGTCCCTTAACGAGATTAACATTTTTCATTACCATCAAAATCACACCTGATACAATGGAAAATTATGA
ATATATCACTAAGAAACAAGTAACTATTTATTATGATTTTGCTAGAGGTAACTCTTCTCAAGAAAATCTTATCATCAATC
CTTTTGGCTTCAAAGTGTTTGACATTCAAATCACAGATTTACAAAACGAACAGACGGTAAGCGAAATTTTGAGAAAGATT
AAAGAAGTGGAATCAAAAAATAAGGCATTAAAACAATAA

Upstream 100 bases:

>100_bases
TAATTGAAATTGTTTTAAGGAGTTTTTGATGAAAAAATTTCTCAAGTATTTCTCAAGTTTTACAACCAACGAACCAATAA
CTAAACAATAAAGCTGTCGC

Downstream 100 bases:

>100_bases
GAGCATGTTTAATATTAAAAGGACTTTTTTAATAACGATCATAAGTTTTTTTCTCATTGTTCCTAATTGGTTGAAAGCTA
TTGATTTGCCCATTGTTTCA

Product: cag pathogenicity island protein V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLGKKNEEVLVDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNVAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVK
RSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQRE
KVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
KEVESKNKALKQ

Sequences:

>Translated_252_residues
MLGKKNEEVLVDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNVAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVK
RSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQRE
KVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
KEVESKNKALKQ
>Mature_252_residues
MLGKKNEEVLVDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNVAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVK
RSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQRE
KVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
KEVESKNKALKQ

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29067; Mature: 29067

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKKNEEVLVDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNVAAVTSIVMMMPLK
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQL
CCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEEEECC
DTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
CCHHHHHHHEEEEEEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHH
KEVESKNKALKQ
HHHHHHHHHHCC
>Mature Secondary Structure
MLGKKNEEVLVDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNVAAVTSIVMMMPLK
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQL
CCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEEEECC
DTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
CCHHHHHHHEEEEEEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHH
KEVESKNKALKQ
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA