Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562787

Identifier: 108562787

GI number: 108562787

Start: 374694

End: 375209

Strand: Reverse

Name: 108562787

Synonym: HPAG1_0362

Alternate gene names: NA

Gene position: 375209-374694 (Counterclockwise)

Preceding gene: 108562796

Following gene: 108562786

Centisome position: 23.5

GC content: 38.18

Gene sequence:

>516_bases
ATGGGCTTGAAAAATCTCTCAACACTTCTGGTGTTTTTATTCTTTTGTTTGGGGTGTGTGAGCAATTTTAATAAAGACAC
TTACACGCTAGACTTAGTGTTAGAAAAAAAGATCCAAGCCAGCAGGAAAGGCGAAATCACCCAAAATAATGTGCCTATCA
TCACGGCTATCGCTACGCATTTAAACGATGTGGATAGCGGCACTTACTATGACCATGAGTATTTTTTAGTGGAGATTTTC
ACGCAAAATAACGACTGGATAGATGATGGCTATATTTCTTATGAACTTTTTGGCACAAAACCTATAGGCTCAGAGCCTTT
ATGGGTGCGAGAAATCACAAAAGATGAATTTGATGGCATTTTAGAAACCACGAACAGATGGAGCAGAGCTTTTTTGCTCG
CTTTTAACAAATTGGATTATTTAGCGGTGCAAGAAGCCAAACTAGAGCTTGATGCCTATAGTTTAGGCAAGATTGTTTTT
AATTTCGCTTATCAAGTCCCCCTACCTCAATTTTAA

Upstream 100 bases:

>100_bases
TGGTTTGGAGCAAGTGTCGGCATTTTTTTGGCATAAAACCCCCTTTTAGTTATAATATCGGTTTTATTTTAGCTAAAAAT
GGCATGGGTTTTAGCAAGGA

Downstream 100 bases:

>100_bases
TGCGCTTAGATTACGCTTTATTCAACCAGCATTTAGTGAGCAGCAGAGAAAAAGCTAAAGCGTTGGTTTTAAAAAATCAG
GTTTTAGTCAATAAAATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MGLKNLSTLLVFLFFCLGCVSNFNKDTYTLDLVLEKKIQASRKGEITQNNVPIITAIATHLNDVDSGTYYDHEYFLVEIF
TQNNDWIDDGYISYELFGTKPIGSEPLWVREITKDEFDGILETTNRWSRAFLLAFNKLDYLAVQEAKLELDAYSLGKIVF
NFAYQVPLPQF

Sequences:

>Translated_171_residues
MGLKNLSTLLVFLFFCLGCVSNFNKDTYTLDLVLEKKIQASRKGEITQNNVPIITAIATHLNDVDSGTYYDHEYFLVEIF
TQNNDWIDDGYISYELFGTKPIGSEPLWVREITKDEFDGILETTNRWSRAFLLAFNKLDYLAVQEAKLELDAYSLGKIVF
NFAYQVPLPQF
>Mature_170_residues
GLKNLSTLLVFLFFCLGCVSNFNKDTYTLDLVLEKKIQASRKGEITQNNVPIITAIATHLNDVDSGTYYDHEYFLVEIFT
QNNDWIDDGYISYELFGTKPIGSEPLWVREITKDEFDGILETTNRWSRAFLLAFNKLDYLAVQEAKLELDAYSLGKIVFN
FAYQVPLPQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19690; Mature: 19558

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKNLSTLLVFLFFCLGCVSNFNKDTYTLDLVLEKKIQASRKGEITQNNVPIITAIATH
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCEEEEEHHH
LNDVDSGTYYDHEYFLVEIFTQNNDWIDDGYISYELFGTKPIGSEPLWVREITKDEFDGI
HCCCCCCEEECCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEHHCHHHHHHH
LETTNRWSRAFLLAFNKLDYLAVQEAKLELDAYSLGKIVFNFAYQVPLPQF
HHHHHHHHHEEHHHHCCCCCEEEHHHHEEECHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLKNLSTLLVFLFFCLGCVSNFNKDTYTLDLVLEKKIQASRKGEITQNNVPIITAIATH
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCEEEEEHHH
LNDVDSGTYYDHEYFLVEIFTQNNDWIDDGYISYELFGTKPIGSEPLWVREITKDEFDGI
HCCCCCCEEECCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEHHCHHHHHHH
LETTNRWSRAFLLAFNKLDYLAVQEAKLELDAYSLGKIVFNFAYQVPLPQF
HHHHHHHHHEEHHHHCCCCCEEEHHHHEEECHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA