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The map label for this gene is 108562692

Identifier: 108562692

GI number: 108562692

Start: 272753

End: 273475

Strand: Direct

Name: 108562692

Synonym: HPAG1_0267

Alternate gene names: NA

Gene position: 272753-273475 (Clockwise)

Preceding gene: 108562691

Following gene: 108562693

Centisome position: 17.09

GC content: 39.28

Gene sequence:

>723_bases
ATGATGTTTGATAACACGCTTGTTAATCTCTTTGACACAGCGCCTCTTTTAACTTCGCTTTTAGCTGGGATTTTAACTTT
TTTAAGCCCTTGCGTGTTGCCTTTGATCCCGGCGTATATGTCTTATATCTCTCAAATTTCTTTAGAGGATATTAAAGATG
GTAAGGCTAAAAGGGTTTCGGTTTTTTTAAAATCCTTGATGTTTGTGGTAGGGTTTTCGCTCGTGTTTTTGGGCGTGGGC
ATGTCTATGGCCAAGCTTATCCATAGCTTTTCGTTTTCCTGGGTGAATTATATCGCTGGGGGGATTGTGATCCTTTTTGG
TTTGCATTTTTTAGGCGTGTTTCGTTTTTCATTTTTGTATAAGACTCAAAGCGTTCGTTTGGCGAGCAAATCTAATAGCA
TGCAGCGCTTTTACCCCTTTCTTTTGGGCATGAGTTTCGCTTTAGGCTGGACGCCATGCATTGGGCCGATATTCACTTCT
ATAGTGATCATGAGCGCGAGTAAGGACGCTTATGGCTTAATGCTTATGGTGGTGTTTGTAATGGGATTGGCGATCCCTTT
TTTATTAGTGGCTTTAATGCTAGAAAGAGCGCTTTTATTTTTAAAATCCTTAAAGAAATACAACCGCGCGATTGAGATTG
TTTCAGGGTTGGTGCTTATTTTAATGGGAATATTGATCATGACAAATTCTTTAGAAAGCCTGACTAACTTTTTACAAAAT
TAG

Upstream 100 bases:

>100_bases
GGCGTTTGTGGTAGAAAATAACGAAATTGTGCCTAAGATTAAGTGAAGTTTGGTTATCCTAAAAAATATTAAGAAATGGT
TATTTTTAAAAAAGGATTGA

Downstream 100 bases:

>100_bases
GAGGGTTTGATGCTGTTAAAAAACGCTTCGTTTTATGATGATGAGGTTTTAAAAAGAGCGGATATCCGCTTAAAAGATTC
CCTCATTACAGAGATTGAAG

Product: cytochrome c biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MMFDNTLVNLFDTAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVG
MSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSFLYKTQSVRLASKSNSMQRFYPFLLGMSFALGWTPCIGPIFTS
IVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERALLFLKSLKKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN

Sequences:

>Translated_240_residues
MMFDNTLVNLFDTAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVG
MSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSFLYKTQSVRLASKSNSMQRFYPFLLGMSFALGWTPCIGPIFTS
IVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERALLFLKSLKKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN
>Mature_240_residues
MMFDNTLVNLFDTAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVG
MSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSFLYKTQSVRLASKSNSMQRFYPFLLGMSFALGWTPCIGPIFTS
IVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERALLFLKSLKKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 26642; Mature: 26642

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]