Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562669

Identifier: 108562669

GI number: 108562669

Start: 249065

End: 249466

Strand: Reverse

Name: 108562669

Synonym: HPAG1_0244

Alternate gene names: NA

Gene position: 249466-249065 (Counterclockwise)

Preceding gene: 108562670

Following gene: 108562668

Centisome position: 15.63

GC content: 34.83

Gene sequence:

>402_bases
GTGGGAATGAATGAGCTTATCCGCTATGGCTTGATATTCCTCTTTTTTTTAAAAGCGTTTGGGCTTGATTATGGGATAGA
TAAAACGCTAGAATTAAAAAAAGATGAAGTGTTTAAAGCGATCATCAAAGACACTTCAAATGAACAAACCAAAGAAATCA
CGCTCTATTGGACGCTATATGCAAATAAAGGTTTAGTCATCAACATGCGTTTTAACCATTTCCCTTACCAGTTTATTTTA
TACACCGATCATGCGAAAAACACCTATAACCTCAAAGTTTTTGAAGAAAAATTTTCTTCTAACAGCACTCTGTCGCTTGT
GTTTAAAGATTTTAAAGAAGATAAAGCCGCTTTAAGGCTTTTAGCCCTTATGCCCCTTGTTTTTTCTCCTAAAGAGCCTT
AA

Upstream 100 bases:

>100_bases
GAATCTTTCGCTAAAGCTTTAAGAATGGATGAAGAGTTGCAACAAAAAATAGAGAGCAGGAAAACAGACATTGTGATCCA
ATCCATGGCGAATATTCTCA

Downstream 100 bases:

>100_bases
GGAATTTGCATGCAAGAAAAACAACTTAAAACCATTCAAAATAAGATCGCTTCTTGGATCAAAGAAATAGAAAGCGGCTT
TATAGATGCATTGTTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MGMNELIRYGLIFLFFLKAFGLDYGIDKTLELKKDEVFKAIIKDTSNEQTKEITLYWTLYANKGLVINMRFNHFPYQFIL
YTDHAKNTYNLKVFEEKFSSNSTLSLVFKDFKEDKAALRLLALMPLVFSPKEP

Sequences:

>Translated_133_residues
MGMNELIRYGLIFLFFLKAFGLDYGIDKTLELKKDEVFKAIIKDTSNEQTKEITLYWTLYANKGLVINMRFNHFPYQFIL
YTDHAKNTYNLKVFEEKFSSNSTLSLVFKDFKEDKAALRLLALMPLVFSPKEP
>Mature_132_residues
GMNELIRYGLIFLFFLKAFGLDYGIDKTLELKKDEVFKAIIKDTSNEQTKEITLYWTLYANKGLVINMRFNHFPYQFILY
TDHAKNTYNLKVFEEKFSSNSTLSLVFKDFKEDKAALRLLALMPLVFSPKEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15640; Mature: 15509

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMNELIRYGLIFLFFLKAFGLDYGIDKTLELKKDEVFKAIIKDTSNEQTKEITLYWTLY
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEEEEEEE
ANKGLVINMRFNHFPYQFILYTDHAKNTYNLKVFEEKFSSNSTLSLVFKDFKEDKAALRL
ECCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEEHHCCCCCEEEEEEHHHHHHHHHHHH
LALMPLVFSPKEP
HHHHHHHCCCCCC
>Mature Secondary Structure 
GMNELIRYGLIFLFFLKAFGLDYGIDKTLELKKDEVFKAIIKDTSNEQTKEITLYWTLY
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEEEEEEE
ANKGLVINMRFNHFPYQFILYTDHAKNTYNLKVFEEKFSSNSTLSLVFKDFKEDKAALRL
ECCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEEHHCCCCCEEEEEEHHHHHHHHHHHH
LALMPLVFSPKEP
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA