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The map label for this gene is 108562643

Identifier: 108562643

GI number: 108562643

Start: 223252

End: 223557

Strand: Direct

Name: 108562643

Synonym: HPAG1_0218

Alternate gene names: NA

Gene position: 223252-223557 (Clockwise)

Preceding gene: 108562642

Following gene: 108562644

Centisome position: 13.99

GC content: 31.7

Gene sequence:

>306_bases
ATGGGGTTAAAAAATAAAATCAAGGGTTTTATTAAAGAGAGAATGCCTTTTGTGGTTAGATGTATTCGTAGTTTTAAGGG
GAACCAAAACGCTTATTGTGAAATCAATCATGAAATTAAGGAAATGTTAGAGGCTAAAAAACTTCGTTCTCTTCAAGAAG
AAGCTTTATTCAACCATGACCATCAAGAAAGCGTGTTTTTAGCTATCGCCTCTTTAAATAATGAATATTTCATTGAACGC
AATAAGAGTATTTATAAAAATAGTTCTCTTAATTATAATTATGGGGGGGGGGCATTTAGAAGATAG

Upstream 100 bases:

>100_bases
AGCTAGACAAAGAAGTTAGGGAGCGTTTTGAAAATGTAGCGGGAGTGTAGTATAATAAGATTTTGCTTTTAATAGCGTTT
TATTCCAATTAGGAGTTTTT

Downstream 100 bases:

>100_bases
GGTTATCCATCCCACTTTAACTCTACCCAATCCCACGCATTCAGGTTATTTTGACTACGATAAAAAAAGTCAAAACCCTA
AAAGCCCTCTAAACCCATGG

Product: beta-1,4-N-acetylgalactosamyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MGLKNKIKGFIKERMPFVVRCIRSFKGNQNAYCEINHEIKEMLEAKKLRSLQEEALFNHDHQESVFLAIASLNNEYFIER
NKSIYKNSSLNYNYGGGAFRR

Sequences:

>Translated_101_residues
MGLKNKIKGFIKERMPFVVRCIRSFKGNQNAYCEINHEIKEMLEAKKLRSLQEEALFNHDHQESVFLAIASLNNEYFIER
NKSIYKNSSLNYNYGGGAFRR
>Mature_100_residues
GLKNKIKGFIKERMPFVVRCIRSFKGNQNAYCEINHEIKEMLEAKKLRSLQEEALFNHDHQESVFLAIASLNNEYFIERN
KSIYKNSSLNYNYGGGAFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11880; Mature: 11749

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKNKIKGFIKERMPFVVRCIRSFKGNQNAYCEINHEIKEMLEAKKLRSLQEEALFNHD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCC
HQESVFLAIASLNNEYFIERNKSIYKNSSLNYNYGGGAFRR
CCHHHHHHEECCCCCEEEECCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLKNKIKGFIKERMPFVVRCIRSFKGNQNAYCEINHEIKEMLEAKKLRSLQEEALFNHD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCC
HQESVFLAIASLNNEYFIERNKSIYKNSSLNYNYGGGAFRR
CCHHHHHHEECCCCCEEEECCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA