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The map label for this gene is yqhA [C]

Identifier: 108562608

GI number: 108562608

Start: 189275

End: 189808

Strand: Direct

Name: yqhA [C]

Synonym: HPAG1_0183

Alternate gene names: 108562608

Gene position: 189275-189808 (Clockwise)

Preceding gene: 108562607

Following gene: 108562613

Centisome position: 11.86

GC content: 41.01

Gene sequence:

>534_bases
ATGCTAGAAAAATTGATTGAAAGAGTGTTGTTTGCCACTCGTTGGTTGCTAGCCCCTTTATGCATTGCCATGTCGTTAGT
GTTGGTGGTTTTAGGCTATGTGTTCATGAAAGAGTTGTGGCACATGCTCAGCCATTTAGACACCATTAGTGAAACGGATT
TGGTTTTATCAGCCTTAGGTTTAGTGGATTTGTTGTTTATGGCCGGGCTTGTTTTGATGGTGTTGCTCGCTAGTTATGAA
AGCTTTGTTTCTAAATTAGACAAGGTGGATGCCAGTGAAATCACTTGGCTAAAGCACACGGATTTTAACGCTTTAAAATT
AAAGGTTTCACTCTCCATTGTAGCGATTTCGGCGATTTTCTTGCTCAAACGCTACATGAGTTTAGAAGATGTTCTATCCA
GCATTCCTAAAGACACGCCCTTATCGCATAACCCCATTTTTTGGCAAGTGGTGATCCATTTGGTGTTTGTGTGTTCAGCG
CTTTTAGCCGCCGTTACCAATAACATCGCTTTTTCGCAAAATAAAGGGCATTAA

Upstream 100 bases:

>100_bases
ATTCAAGCTATCCTATAAGCCAAAGAGCACTATCCCATTAGGTTTTTTAAAATTAGCTATAATCAAGGGTTTAAAAATAA
TCCTAAAAAAGAGTTTGAAC

Downstream 100 bases:

>100_bases
AAGTTTTAAAGCTCTCTTTCAGGAAGGACTTTAGACCATTCTTTAATCAAGCGTAAAAAGAAGGACGCATCAGGCGAAGT
TTTTTCATGGATTAAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYE
SFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSA
LLAAVTNNIAFSQNKGH

Sequences:

>Translated_177_residues
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYE
SFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSA
LLAAVTNNIAFSQNKGH
>Mature_177_residues
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYE
SFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSA
LLAAVTNNIAFSQNKGH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=164, Percent_Identity=40.8536585365854, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 19815; Mature: 19815

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLAAVTNNIAFSQNKGH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLAAVTNNIAFSQNKGH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA