Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562581

Identifier: 108562581

GI number: 108562581

Start: 162312

End: 163268

Strand: Direct

Name: 108562581

Synonym: HPAG1_0156

Alternate gene names: NA

Gene position: 162312-163268 (Clockwise)

Preceding gene: 108562580

Following gene: 108562583

Centisome position: 10.17

GC content: 40.75

Gene sequence:

>957_bases
ATGTTGAGTAGAGACATTGTCCAATATTCCAAGATCCGCACCGAGCTATACGCTTATCTTACCTATTTGTTTTCGCACAA
TATCCGCAACCATCTCCCTGAAATCACTTTGGATTATTTAAACAAACAGATCAGAAAAATGCACGCTGAAATCAAAATGG
CAAAAAGTTTTTTTGTGTTAGACGCTAAAGGCATGCTAATTCTTAAGCCAAGCCAGCTTAAAGAACAGGGGCATAAGGAG
GGGATATTAGAGCATGATTTAACAGAAGGGATTGAATTAGAATCACATGCCAGCTTTAGCGATAAGTATTATTTTTATCA
AGCCGTGAGTGAAAAGCGTTGCATTTTAACAGACCCCTATCCTTCTAAAAAAGGAAACCATTTGGTAGTGAGTGCGTCTT
ACCCGGTGTATGATCAAAATAACGATCTGGTGTTTGTGGTGTGCTTGCAAATCCCTTTGAGGGTGGCGATTGAGATTAGC
TCGCCTTCAAAGTATTTCAGGACCTTTAGCGAAGGGAGCATGGTCATGTATTTTATGATTTCTATCATGCTCACTTTAGT
GTCGTTGCTTTTATTTGTGAAATGCATTTCTAGCTTTTGGACAGCGATTGTCAATTTTAGCAGCTTTGACATTAAAGAAG
TGTTCCACCCCATTGTGCTTTTAACCCTAGCCTTAGCCACCTTTGATCTAGTCAAGGCGATTTTTGAAGAGGAAGTTTTA
GGTAAAAATAGCGGGGACAACCACCATGCGATCCACCGCACGATGATCAGGTTTTTAGGCTCTATCATTATCGCCTTAGC
CATTGAAGCGTTAATGTTAGTGTTTAAATTCAGCGTGAGCGAACCGGATAAAATCACTTATGCGGTGTATTTGGCTGTCG
GCGTGGCGGTGCTTTTGATCAGTTTAGCGATTTATGTCAAATTCGCTTATAGCGTGTTGCCCAAACGAGAACGCTAA

Upstream 100 bases:

>100_bases
AAAAAAACGCCTCCTTTATCATTGATGCAAGGGGTGGTTTAAACAATTCTTTAAAACAAGTGCTACAATTCATCGCATAA
ATTTTTTTAAAGGCCTTTTG

Downstream 100 bases:

>100_bases
GAGTTAAAGAATTTTTCTTTTAAGCGTTTGAAAATCCTATTCAATCTAAAAAAGACATATTCTAAAAGGGTTTTTTTATT
GAGTAGGGGGGCAAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: General Glycosylation Pathway Protein PglG; Cache Domain Protein; Inner Membrane Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIRKMHAEIKMAKSFFVLDAKGMLILKPSQLKEQGHKE
GILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLVFVVCLQIPLRVAIEIS
SPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAVGVAVLLISLAIYVKFAYSVLPKRER

Sequences:

>Translated_318_residues
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIRKMHAEIKMAKSFFVLDAKGMLILKPSQLKEQGHKE
GILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLVFVVCLQIPLRVAIEIS
SPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAVGVAVLLISLAIYVKFAYSVLPKRER
>Mature_318_residues
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIRKMHAEIKMAKSFFVLDAKGMLILKPSQLKEQGHKE
GILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLVFVVCLQIPLRVAIEIS
SPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAVGVAVLLISLAIYVKFAYSVLPKRER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36393; Mature: 36393

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIRKMHAEIKMAKSFFVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DAKGMLILKPSQLKEQGHKEGILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPY
ECCCEEEECHHHHHHCHHHCCCHHHHHHCCCCCCCCCCCCCCHHHEEHHCCCCEEEECCC
PSKKGNHLVVSASYPVYDQNNDLVFVVCLQIPLRVAIEISSPSKYFRTFSEGSMVMYFMI
CCCCCCEEEEEECCCEEECCCCEEEEEEEECCEEEEEEECCCHHHHHHHCCCCHHHHHHH
SIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAVGVAVLLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SLAIYVKFAYSVLPKRER
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIRKMHAEIKMAKSFFVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DAKGMLILKPSQLKEQGHKEGILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPY
ECCCEEEECHHHHHHCHHHCCCHHHHHHCCCCCCCCCCCCCCHHHEEHHCCCCEEEECCC
PSKKGNHLVVSASYPVYDQNNDLVFVVCLQIPLRVAIEISSPSKYFRTFSEGSMVMYFMI
CCCCCCEEEEEECCCEEECCCCEEEEEEEECCEEEEEEECCCHHHHHHHCCCCHHHHHHH
SIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAVGVAVLLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SLAIYVKFAYSVLPKRER
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA