| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is glmM [H]
Identifier: 108562501
GI number: 108562501
Start: 76447
End: 77784
Strand: Reverse
Name: glmM [H]
Synonym: HPAG1_0076
Alternate gene names: 108562501
Gene position: 77784-76447 (Counterclockwise)
Preceding gene: 108562508
Following gene: 108562500
Centisome position: 4.87
GC content: 41.33
Gene sequence:
>1338_bases ATGAAAATTTTTGGGACTGATGGCGTGAGGGGTAAAGCAGGGGTGAAACTCACCCCCATGTTTGTGATGCGTTTAGGCAT TGCTGCCGGGTTGTATTTTAAAAAACATTCTCAAACGAATAAAATTCTAATCGGTAAAGACACCAGAAAAAGCGGCTACA TGGTAGAAAACGCTTTAGTGAGCGCTCTCACTTCCATAGGCTATAATGTGATTCAAATAGGGCCTATGCCCACCCCTGCG ATTGCGTTTTTAACCGAAGACATGCGCTGTGATGCGGGCATTATGATAAGCGCGAGCCACAACCCTTTTGAAGATAATGG TATTAAGTTTTTCAATTCTTATGGCTATAAGCTTAAAGAAGAAGAAGAAAAAGCGATTGAAGAAATCTTTCATGATGAAG GATTACTGCATTCTAGTTATAAAGTGGGCGAGAGCGTCGGTAGCGCTAAAAGGATAGACGATGTCATAGGGCGCTATATT GTGCATTTAAAACACTCTTTCCCCAAACATTTGAATTTACAGAGTTTAAGGATCGTGCTAGATACCGCTAATGGTGCAGC TTATAAGGTGGCTCCGGTCGTTTTTAGCGAGCTTGGGGCTGATGTGTTAGTGATCAATGATGAACCTAACGGGTGTAATA TTAATGAGCAATGCGGGGCTTTACACCCTAACCAACTAAGCCAGGAAGTGAAAAAATACCGCGCGGATTTAGGCTTTGCT TTTGATGGCGATGCGGATAGGCTAGTGGTGGTGGATAATTTAGGGAATATCGTGCATGGGGACAAGCTTTTAGGGGTGTT AGGGGTTTATCAAAAATCTAAAAACGCCCTTTCTTCTCAAGCGATTGTCGCTACAAACATGAGCAATTTAGCCCTTAAAG AATACTTAAAATCCCAAGATTTAGAATTGAAGCATTGCGCGATTGGGGATAAGTTTGTGAGCGAATGCATGCGATTGAAC AAAGCCAATTTTGGAGGCGAGCAAAGCGGGCATATCATTTTTAGCGATTACGCTAAAACAGGCGATGGCTTGGTGTGTGC GTTGCAAGTGAGCGCGCTTGTGTTAGAAAGTAAGCAAGTGAGTTCTGTTGCATTAAACCCCTTTGAATTATACCCCCAAA ACCTAGTGAATTTGAATGTCCAAAAAAAGCCTCCTTTAGAAAGCCTGAAAGGTTATAGCGCTCTTTTAAAAGAATTAGAC CAACTAGAAATCCGCCATTTGATCCGCTATAGTGGCACTGAAAACAAATTGCGAATCCTTTTAGAAGCTAAAGATGAAAA ACTTTTAGAATCCAAAATGCAAGAATTAAAAGAGTTTTTTGAAGGGCATTTGTGCTAA
Upstream 100 bases:
>100_bases TGATTTGCCATAGCCTTGTTTTAATCCCTTTGTAATGTAAAATTTGGCATAATTCTATCTAAAAATTGATTAAAAATAGT TTAAAAGGTATTTTATAACG
Downstream 100 bases:
>100_bases AAACCACTAAAAAAAGCCTGTTGGTTTTTATGGGGGGTTTTTTTCTTATTTTTGGTGTGGATCAAGCGATTAAATACGCT ATTTTAGAGGGGTTTCGCTA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPA IAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEEKAIEEIFHDEGLLHSSYKVGESVGSAKRIDDVIGRYI VHLKHSFPKHLNLQSLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQEVKKYRADLGFA FDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAIVATNMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLN KANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKQVSSVALNPFELYPQNLVNLNVQKKPPLESLKGYSALLKELD QLEIRHLIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGHLC
Sequences:
>Translated_445_residues MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPA IAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEEKAIEEIFHDEGLLHSSYKVGESVGSAKRIDDVIGRYI VHLKHSFPKHLNLQSLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQEVKKYRADLGFA FDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAIVATNMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLN KANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKQVSSVALNPFELYPQNLVNLNVQKKPPLESLKGYSALLKELD QLEIRHLIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGHLC >Mature_445_residues MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPA IAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEEKAIEEIFHDEGLLHSSYKVGESVGSAKRIDDVIGRYI VHLKHSFPKHLNLQSLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQEVKKYRADLGFA FDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAIVATNMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLN KANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKQVSSVALNPFELYPQNLVNLNVQKKPPLESLKGYSALLKELD QLEIRHLIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGHLC
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=430, Percent_Identity=43.7209302325581, Blast_Score=313, Evalue=1e-86, Organism=Escherichia coli, GI1788361, Length=463, Percent_Identity=27.4298056155508, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 49126; Mature: 49126
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALV CEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHH SALTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKE HHHHHCCCCEEEECCCCCCHHHHEECCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCH EEEKAIEEIFHDEGLLHSSYKVGESVGSAKRIDDVIGRYIVHLKHSFPKHLNLQSLRIVL HHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE DTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQEVKKYRADLGFA ECCCCCEEEHHHHHHHHCCCCEEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCEE FDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAIVATNMSNLALKEYLKSQD ECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCC LELKHCAIGDKFVSECMRLNKANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKQV CCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEHHHHHHCCHHH SSVALNPFELYPQNLVNLNVQKKPPLESLKGYSALLKELDQLEIRHLIRYSGTENKLRIL HHHCCCHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LEAKDEKLLESKMQELKEFFEGHLC EECCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALV CEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHH SALTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKE HHHHHCCCCEEEECCCCCCHHHHEECCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCH EEEKAIEEIFHDEGLLHSSYKVGESVGSAKRIDDVIGRYIVHLKHSFPKHLNLQSLRIVL HHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE DTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQEVKKYRADLGFA ECCCCCEEEHHHHHHHHCCCCEEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCEE FDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAIVATNMSNLALKEYLKSQD ECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCC LELKHCAIGDKFVSECMRLNKANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKQV CCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEHHHHHHCCHHH SSVALNPFELYPQNLVNLNVQKKPPLESLKGYSALLKELDQLEIRHLIRYSGTENKLRIL HHHCCCHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LEAKDEKLLESKMQELKEFFEGHLC EECCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA