Click here to switch to the map view.

The map label for this gene is 108562434

Identifier: 108562434

GI number: 108562434

Start: 6598

End: 8493

Strand: Reverse

Name: 108562434

Synonym: HPAG1_0009

Alternate gene names: NA

Gene position: 8493-6598 (Counterclockwise)

Preceding gene: 108562435

Following gene: 108562429

Centisome position: 0.53

GC content: 43.3

Gene sequence:

>1896_bases
ATGGTGAAAAACACCGGCGAATTGAAAAAACTCTCAGACACTTATGAAAATTTGAGCAACCTTTTAACCAATTTTAACAA
CCTCAATAAGGCGGTAACGAACGCGAGTAGCCCTTCAGAAATCAATGCCACGATCGATAATTTAAAAGCAAACACGCAAG
GGCTGATTGGCGAAAAAACCAACTCCCCGGCCTATCAAGCGGTGTATTTGGCGCTCAATGCGGCGGTGGGGCTGTGGAAT
GTCATCGCCTATAATGTCCAATGCGGTCCTGGTAAAAGTGGGCAACAAAGCGTAACCTTTGATGGCCAGCCAGGACATAA
TTCAAGTTCCATCAATTGCAATTTAACCGGTTATAACAACGGGGTTAGCGGCCCTTTATCCATTGACAATTTTAAAACGC
TTAATCAGGCTTATCAAACTATCCAACAAGCTTTAAAACAAGATAGCGGATTTCCTGTTTTGGATAGTAAAGGAAAACAA
GTAACTATAACAATAACAACGCAAACTAATGGAGCTAGTAAAAGTGAAACTACTACTACTACTAACAACGCTCAAACCCT
TTTGCAAGAAGCCAGTAAAATGATAAGCGTCCTCACTACAAACTGCCCATGGGTAAATACCGCTCATAACTCAAATGGGG
GTGCACCGTGGGGTTTAAATACGACAGGGAACGTGTGTCAGGTTTTTGCCACGGAGTTTAGCGCCGTTACTAGCATGATC
AAAAACGCCCAAGAAATCGTAACGCAAGCGCAAAGCCTTAACAACCCACAAAACAATCAAAACGCGCCACAAGATTTCAA
TCCTTACACCTCTGCTGATAGGGCTTTCGCTCAAAACATGCTCAATCACGCGCAAGCGCAAGCCAAGATGCTTGAACTAG
CCGATCAAATCAAAAAAGACCTTAACACTATCCCAAGCCAATTTGTATCAAATTACTTGGCAGCTTGCAGAAATGGGGGT
GGGACATTACCTAATGAAGGGGTTACTAGCAACACTTGGGGGGCCGGTTGCGCGTATGTGGAAGAGACGATAACCACCCT
AAACAACAGCCTTGCGCATTTTGGCACTCAAGCCGAGCAAATCAAGCAATCTGAGTTGCTGGCGCGCACGATACTTGATT
TTAGAGGCAGCCTTAGCAATTTAAACAACACTTATAACAGCATCACCACGACCGCTTCAAACACGCCTAATTCCCCATTC
CTTAAAGATTTGATAAGCCAATCCACTAACCCTAATAACCCCGGGGGCTTACAGGCCGTTTATCAAGTCAACCAAAGCGC
TTATTCGCAATTATTAAGCGCCACGCAAGAATTAGGGCATAACCCTTTCAGACGCATTGGATTAATCAGCTCTCAAACCA
ACAACGGCGCCATGAATGGGATCGGCGTGCAAATAGGGTATAAACAATTTTTTGGTGAAAAAAGAAGATGGGGATTAAGG
TATTACGGCTTTTTTGATTACAACCATGCCTATATCAAATCCAGCTTTTTCAACTCCGCCTCTGATGTGTTCACTTATGG
GGTAGGAACAGATGTCCTCTATAACTTTATCAACGATAAAGCCACCAAAAACAGCAAAATTTCTTTTGGGGTGTTTGGGG
GGATTGCGTTAGCTGGCACTTCGTGGCTTAATTCTCAATACGTGAATTTAGCGACATTCAATAATTTCTATAGCGCTAAA
ATGAATGTGGCGAATTTCCAATTCTTATTCAACTTGGGCTTGAGGATGAACCTCGCTAAGAATAAGAAAAAAGCGAGCGA
TCATGCGGCGCAGCATGGCGTGGAATTAGGCGTGAAGATCCCTACTATTAACACGAATTACTATTCTTTGCTAGGCACTC
AACTCCAATACCGCAGGCTTTATAGCGTGTATTTGAATTATGTGTTCGCTTACTAG

Upstream 100 bases:

>100_bases
CCCTTTTACTCTCTCTCTCTCTCTCGCTTCATCGCTTTTAAACGCTGAAGACAACGGCTTTTTTATAAGCGCGGGCTATC
AAATCGGTGAAGCCGCTCAA

Downstream 100 bases:

>100_bases
AAGCTAAAAACCCTTTGTGAAACTCCCTTCTTAAGGGATTTCTTTTAAAGTCTTTCTTTTTTTGAACCCTTTTTTTTAAA
CCCTCTTTTTTTGGGGGGTC

Product: outer membrane protein HopZ

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopH; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MVKNTGELKKLSDTYENLSNLLTNFNNLNKAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWN
VIAYNVQCGPGKSGQQSVTFDGQPGHNSSSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQ
VTITITTQTNGASKSETTTTTNNAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWGLNTTGNVCQVFATEFSAVTSMI
KNAQEIVTQAQSLNNPQNNQNAPQDFNPYTSADRAFAQNMLNHAQAQAKMLELADQIKKDLNTIPSQFVSNYLAACRNGG
GTLPNEGVTSNTWGAGCAYVEETITTLNNSLAHFGTQAEQIKQSELLARTILDFRGSLSNLNNTYNSITTTASNTPNSPF
LKDLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGLR
YYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNSKISFGVFGGIALAGTSWLNSQYVNLATFNNFYSAK
MNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY

Sequences:

>Translated_631_residues
MVKNTGELKKLSDTYENLSNLLTNFNNLNKAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWN
VIAYNVQCGPGKSGQQSVTFDGQPGHNSSSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQ
VTITITTQTNGASKSETTTTTNNAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWGLNTTGNVCQVFATEFSAVTSMI
KNAQEIVTQAQSLNNPQNNQNAPQDFNPYTSADRAFAQNMLNHAQAQAKMLELADQIKKDLNTIPSQFVSNYLAACRNGG
GTLPNEGVTSNTWGAGCAYVEETITTLNNSLAHFGTQAEQIKQSELLARTILDFRGSLSNLNNTYNSITTTASNTPNSPF
LKDLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGLR
YYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNSKISFGVFGGIALAGTSWLNSQYVNLATFNNFYSAK
MNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY
>Mature_631_residues
MVKNTGELKKLSDTYENLSNLLTNFNNLNKAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWN
VIAYNVQCGPGKSGQQSVTFDGQPGHNSSSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQ
VTITITTQTNGASKSETTTTTNNAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWGLNTTGNVCQVFATEFSAVTSMI
KNAQEIVTQAQSLNNPQNNQNAPQDFNPYTSADRAFAQNMLNHAQAQAKMLELADQIKKDLNTIPSQFVSNYLAACRNGG
GTLPNEGVTSNTWGAGCAYVEETITTLNNSLAHFGTQAEQIKQSELLARTILDFRGSLSNLNNTYNSITTTASNTPNSPF
LKDLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGLR
YYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNSKISFGVFGGIALAGTSWLNSQYVNLATFNNFYSAK
MNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68765; Mature: 68765

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNTGELKKLSDTYENLSNLLTNFNNLNKAVTNASSPSEINATIDNLKANTQGLIGEKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
NSPAYQAVYLALNAAVGLWNVIAYNVQCGPGKSGQQSVTFDGQPGHNSSSINCNLTGYNN
CCCHHHHHHHHHHHHHHHEEHHEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCC
GVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQVTITITTQTNGASKSETTTT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCC
TNNAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWGLNTTGNVCQVFATEFSAVTSMI
CCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KNAQEIVTQAQSLNNPQNNQNAPQDFNPYTSADRAFAQNMLNHAQAQAKMLELADQIKKD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNTIPSQFVSNYLAACRNGGGTLPNEGVTSNTWGAGCAYVEETITTLNNSLAHFGTQAEQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
IKQSELLARTILDFRGSLSNLNNTYNSITTTASNTPNSPFLKDLISQSTNPNNPGGLQAV
HHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHH
YQVNQSAYSQLLSATQELGHNPFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGLR
HHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCEEEEECHHHHCCHHHCCCEE
YYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNSKISFGVFGGIALAGT
EEEEECCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH
SWLNSQYVNLATFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKI
HHHCCCEEEEEEECCHHHCCCCHHHHHEEECCCCEEEHHHCHHHHHHHHHHCCCEEEEEE
PTINTNYYSLLGTQLQYRRLYSVYLNYVFAY
CEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKNTGELKKLSDTYENLSNLLTNFNNLNKAVTNASSPSEINATIDNLKANTQGLIGEKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
NSPAYQAVYLALNAAVGLWNVIAYNVQCGPGKSGQQSVTFDGQPGHNSSSINCNLTGYNN
CCCHHHHHHHHHHHHHHHEEHHEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCC
GVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQVTITITTQTNGASKSETTTT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCC
TNNAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWGLNTTGNVCQVFATEFSAVTSMI
CCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KNAQEIVTQAQSLNNPQNNQNAPQDFNPYTSADRAFAQNMLNHAQAQAKMLELADQIKKD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNTIPSQFVSNYLAACRNGGGTLPNEGVTSNTWGAGCAYVEETITTLNNSLAHFGTQAEQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
IKQSELLARTILDFRGSLSNLNNTYNSITTTASNTPNSPFLKDLISQSTNPNNPGGLQAV
HHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHH
YQVNQSAYSQLLSATQELGHNPFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGLR
HHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCEEEEECHHHHCCHHHCCCEE
YYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNSKISFGVFGGIALAGT
EEEEECCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH
SWLNSQYVNLATFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKI
HHHCCCEEEEEEECCHHHCCCCHHHHHEEECCCCEEEHHHCHHHHHHHHHHCCCEEEEEE
PTINTNYYSLLGTQLQYRRLYSVYLNYVFAY
CEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA