| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023121
Identifier: 107023121
GI number: 107023121
Start: 1745940
End: 1746767
Strand: Reverse
Name: 107023121
Synonym: Bcen_1570
Alternate gene names: NA
Gene position: 1746767-1745940 (Counterclockwise)
Preceding gene: 107023122
Following gene: 107023120
Centisome position: 53.02
GC content: 69.32
Gene sequence:
>828_bases ATGAAGACCAACCTTTCCCAACGTCTCACTCAAGGTGCGCTGGTGGCAGCGCTTGGCGCGTCCGTCGCGGGCTGCGGCGG CGTGGTGACGCCCGGCGGGCAGAACGCCGGCGTGACGGGTGCGGCGGCAGGCGGCGCGAGCGCCGGCGCCGATTCGCAAC TGCAGCGCTGCACGTCGCCGCTCGGCACGATCGCGGTCGACGACGGCCGCAACGCCGACTGGTGGGGCCAGTTCGGCAGC GCCACCAAGGTGACGAGCATCGATCCGCTGCTGCGGCTGGCGGTGCAGCAGTCGAACTGCTTCGTGATCACGTCGATCGG CAACCAGAAGAGCGACGCGCGCCTGTCGCGCATCACGCAGCTGCAGCGCAACTCGGGCGAATACCGGGCAGGTTCGAAGC AGCAGAAGGGCCAGCGTGTCGCGGCCGACTACTACATGGAGCCGCAGATCGTGATCAACGATTCGCCGATCGGCGGGATC GGCAGCATGATCGGCGGGCTGATCGGCAACAGCGCGGTGGCGGCGGTGGCGGGCCATCTGCAGACGAAGGCGTCGGTGGT GACGTTGACGCTGTTCGACGTGCGCTCGGCGGTGCAGATCGCGGCGTCGGAAGGCAGCTCGACGGCGACCAACTACGGCG CGGCGCTGGGCGGCTTCGGCGGCGGCGTGGGCGGCGCGCTGGCGGGCTTCTCGTCGACGCCGGAAGGCAAGGCGACGGTC GTGGCGTTCATCGATGCGTACAACAAGATGGTCGTCGCGCTGCGCAGCTACAAGGCGCAGGACGTGAAGGGCGGGCTGGG TCGCGGTGGCCAGTTGCAGGTGAACTGA
Upstream 100 bases:
>100_bases CAGCCGCGGGGAGACCACCATCGCGCGCCACGCCGGGGGGCTTATCGAAGTTCGCACGGACACATAAGCCGAACAACGAC TCTAATCGATCGACAACGAC
Downstream 100 bases:
>100_bases CGTTGCCGGGCCGGCGGGATGCCGCCGGCCGATTCCTGATCTCTGATTCCTGATTCTTGATTCTTGATTCGTGATGGCCG GTGCGTGCGGCGTGATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSPLGTIAVDDGRNADWWGQFGS ATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQLQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGI GSMIGGLIGNSAVAAVAGHLQTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN
Sequences:
>Translated_275_residues MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSPLGTIAVDDGRNADWWGQFGS ATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQLQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGI GSMIGGLIGNSAVAAVAGHLQTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN >Mature_275_residues MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSPLGTIAVDDGRNADWWGQFGS ATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQLQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGI GSMIGGLIGNSAVAAVAGHLQTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27639; Mature: 27639
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSP CCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC LGTIAVDDGRNADWWGQFGSATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQ CCEEEECCCCCCCHHCCCCCCCEECHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH LQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGIGSMIGGLIGNSAVAAVAGHL HHHCCCCCCCCCCHHCCCEEEHHEEECCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHH QTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV HCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCCHHHHHHCCCCCCCCCEEE VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN EEEHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEC >Mature Secondary Structure MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSP CCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC LGTIAVDDGRNADWWGQFGSATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQ CCEEEECCCCCCCHHCCCCCCCEECHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH LQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGIGSMIGGLIGNSAVAAVAGHL HHHCCCCCCCCCCHHCCCEEEHHEEECCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHH QTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV HCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCCHHHHHHCCCCCCCCCEEE VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN EEEHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA