| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023089
Identifier: 107023089
GI number: 107023089
Start: 1711437
End: 1711733
Strand: Reverse
Name: 107023089
Synonym: Bcen_1538
Alternate gene names: NA
Gene position: 1711733-1711437 (Counterclockwise)
Preceding gene: 107023093
Following gene: 107023088
Centisome position: 51.96
GC content: 53.54
Gene sequence:
>297_bases GTGTTAGAAGGGTCACTTTCTGGTGGATGGTCTGAGGATGGGGAAGCGGCTAAGCCGGGTTTCGCGCCTCTCCGTGAACT GCCTGCGGCCGGCGCCTTCACCGTCGATCCAGTTTGGCTATTGCTTCATGCGAATTTCGGATTGTTCCGCTATTGCTCCC ACTCGATTTCCGCGACCGCGGCACACGTCGGCGAAACTGAGCCTTCCGCGCATTCCCGATTGCTCCGCGAACAAAAAAAT GATCGATTCGATCATATAAGGGTTTTCATTGACTGTTATCGTCATGAAACAGGCTAA
Upstream 100 bases:
>100_bases GCGTCTCTTCCTTGGTATGGGGCGCCGCACGCACGCGGTCGGCGGCGGGTTGCGACAGGTGATAATAAAATCACATTGAA TGTGAAAATGCAATCCTGTT
Downstream 100 bases:
>100_bases AATGCACACATCGAGCAGTTATTTTGATTGAAGCGATCATGTGTGCGGAGAACACCCCGGACACCGCGTTTCCTCATACG AGCTGCCCTGGCTGGCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MLEGSLSGGWSEDGEAAKPGFAPLRELPAAGAFTVDPVWLLLHANFGLFRYCSHSISATAAHVGETEPSAHSRLLREQKN DRFDHIRVFIDCYRHETG
Sequences:
>Translated_98_residues MLEGSLSGGWSEDGEAAKPGFAPLRELPAAGAFTVDPVWLLLHANFGLFRYCSHSISATAAHVGETEPSAHSRLLREQKN DRFDHIRVFIDCYRHETG >Mature_98_residues MLEGSLSGGWSEDGEAAKPGFAPLRELPAAGAFTVDPVWLLLHANFGLFRYCSHSISATAAHVGETEPSAHSRLLREQKN DRFDHIRVFIDCYRHETG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10824; Mature: 10824
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEGSLSGGWSEDGEAAKPGFAPLRELPAAGAFTVDPVWLLLHANFGLFRYCSHSISATA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH AHVGETEPSAHSRLLREQKNDRFDHIRVFIDCYRHETG HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLEGSLSGGWSEDGEAAKPGFAPLRELPAAGAFTVDPVWLLLHANFGLFRYCSHSISATA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH AHVGETEPSAHSRLLREQKNDRFDHIRVFIDCYRHETG HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA