| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is dhaT [H]
Identifier: 107023087
GI number: 107023087
Start: 1709153
End: 1710319
Strand: Reverse
Name: dhaT [H]
Synonym: Bcen_1536
Alternate gene names: 107023087
Gene position: 1710319-1709153 (Counterclockwise)
Preceding gene: 107023088
Following gene: 107023086
Centisome position: 51.91
GC content: 64.87
Gene sequence:
>1167_bases ATGACGACTTACCATTTCCAGACAGTCAGGCACATCGTCCACGGTGCAGGCAGCCTCGCCACGCTTCCCGACAAGCTCGC GCTGCTCGATACGCCGGTCAAGCGCATCGCGCTGATCACGCAACCGTCGATGGAAGCGCTCGGCATCGTCGATCGCGTGA TCGAATCGCTCGACGCGAAGGACGTCGACGTGCGCATCATTCGCGGCGTCGAGCCGGAGCCGACCATCGGCAACGTCGAG ACGGTGTTCAACGAGCAGATCGCGCCGTTTGCGCCGCAGGCGATCCTTTCGATCGGCGGCGGCAGCGTGCTCGACGCGGC GAAACTGTTCGCGGTCCGGCTCACCAACGACGAGCCGCTGCGGAACTGGCTCGGCATCGACCTGATCAAGCACCCCGGCG TGCCGATGATCCTGGTGCCGACGACGGCCGGCACCGGCTCCGAGGTCACGCCGAACGCAATCGTGACGCTGCCGGACGAA TCGTTGAAGGTCGGTATCGTCAGCCGTCACCTGCTGCCGCAGATCGTCATTCTGGACCCCGAACTGACGCTCGGCCTGCC GAAGCCGATCACCGCCGCGACCGGCATGGATGCGTTCGTGCACGCACTCGAATCGTACATTTCGACGAAGGCGAACCCGA TCAGCGACATGTACGCGATGGAGTCGATGCGCCTGATCGGCGCGAACATCGTCGACGCGTATGAAAACGGCCAGTCACTG AAGGCGCGCGAGGCGATGATGCTCGGGTCGATGTATGGCGGTCTCGCGCTCACCGCCGCCGGTACCGCTGCGGTACATGC GCTCGCGTACCCGCTCGGCGGAATGTTCAACGTCACGCACGGCGTCGCGAACGCGATGCTGCTGCCGCACGTGATGGCGT TCAACCTCGATGCGATCGAAGACCGGCTGGCGAACGTGGCGCGCGCACTCGATCTCGCGTCGAAAGCCGACACGGACGCC GACGCGGCCCGCAAGCTGATCGACAAGATGGAGGCGTGGACCGCAGCCGTCGACATACCCCAGGATCTGCGCAAGTTCGG CGTGTCCGAAGCACATCTCGACGCGCTCGCGGTTGCCGCATCGAAGGTCAAGCGCCTGCTCGGCAACAACCCGAAGGCGC TCACGCTCGACGACATGAAGTCCATCTACCGGCGCCTGCTGCCGTGA
Upstream 100 bases:
>100_bases TCGCCCGCGCAGCCGCTCGATGCCCAGGCCCGCGAGCGCCTCGCGCAAGCGCTCTCCGTCTACCGCGACGCCGCGCGCGG CCACTGAAACAGGTCTCAGC
Downstream 100 bases:
>100_bases ACGCGCTCGCCCCGCACGCAGCACGGCTGCTGATCGTCGCCGACGACCTGTCGGGCGCGGCCGACTGCGCGGTTGCCGGG TTGCGTCACGGCCTGACGGC
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTTYHFQTVRHIVHGAGSLATLPDKLALLDTPVKRIALITQPSMEALGIVDRVIESLDAKDVDVRIIRGVEPEPTIGNVE TVFNEQIAPFAPQAILSIGGGSVLDAAKLFAVRLTNDEPLRNWLGIDLIKHPGVPMILVPTTAGTGSEVTPNAIVTLPDE SLKVGIVSRHLLPQIVILDPELTLGLPKPITAATGMDAFVHALESYISTKANPISDMYAMESMRLIGANIVDAYENGQSL KAREAMMLGSMYGGLALTAAGTAAVHALAYPLGGMFNVTHGVANAMLLPHVMAFNLDAIEDRLANVARALDLASKADTDA DAARKLIDKMEAWTAAVDIPQDLRKFGVSEAHLDALAVAASKVKRLLGNNPKALTLDDMKSIYRRLLP
Sequences:
>Translated_388_residues MTTYHFQTVRHIVHGAGSLATLPDKLALLDTPVKRIALITQPSMEALGIVDRVIESLDAKDVDVRIIRGVEPEPTIGNVE TVFNEQIAPFAPQAILSIGGGSVLDAAKLFAVRLTNDEPLRNWLGIDLIKHPGVPMILVPTTAGTGSEVTPNAIVTLPDE SLKVGIVSRHLLPQIVILDPELTLGLPKPITAATGMDAFVHALESYISTKANPISDMYAMESMRLIGANIVDAYENGQSL KAREAMMLGSMYGGLALTAAGTAAVHALAYPLGGMFNVTHGVANAMLLPHVMAFNLDAIEDRLANVARALDLASKADTDA DAARKLIDKMEAWTAAVDIPQDLRKFGVSEAHLDALAVAASKVKRLLGNNPKALTLDDMKSIYRRLLP >Mature_387_residues TTYHFQTVRHIVHGAGSLATLPDKLALLDTPVKRIALITQPSMEALGIVDRVIESLDAKDVDVRIIRGVEPEPTIGNVET VFNEQIAPFAPQAILSIGGGSVLDAAKLFAVRLTNDEPLRNWLGIDLIKHPGVPMILVPTTAGTGSEVTPNAIVTLPDES LKVGIVSRHLLPQIVILDPELTLGLPKPITAATGMDAFVHALESYISTKANPISDMYAMESMRLIGANIVDAYENGQSLK AREAMMLGSMYGGLALTAAGTAAVHALAYPLGGMFNVTHGVANAMLLPHVMAFNLDAIEDRLANVARALDLASKADTDAD AARKLIDKMEAWTAAVDIPQDLRKFGVSEAHLDALAVAASKVKRLLGNNPKALTLDDMKSIYRRLLP
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=425, Percent_Identity=27.0588235294118, Blast_Score=118, Evalue=9e-27, Organism=Escherichia coli, GI48994951, Length=384, Percent_Identity=35.9375, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI1789163, Length=375, Percent_Identity=31.7333333333333, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI87082107, Length=351, Percent_Identity=32.7635327635328, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1787493, Length=380, Percent_Identity=30.7894736842105, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789386, Length=406, Percent_Identity=27.5862068965517, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17537053, Length=432, Percent_Identity=25.462962962963, Blast_Score=130, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321181, Length=348, Percent_Identity=34.1954022988506, Blast_Score=206, Evalue=7e-54, Organism=Drosophila melanogaster, GI24657991, Length=398, Percent_Identity=27.6381909547739, Blast_Score=119, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 41434; Mature: 41303
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYHFQTVRHIVHGAGSLATLPDKLALLDTPVKRIALITQPSMEALGIVDRVIESLDAK CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCCC DVDVRIIRGVEPEPTIGNVETVFNEQIAPFAPQAILSIGGGSVLDAAKLFAVRLTNDEPL CCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHEEEEEECCCHHH RNWLGIDLIKHPGVPMILVPTTAGTGSEVTPNAIVTLPDESLKVGIVSRHLLPQIVILDP HHHHCCHHHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEHHHHHHHCCEEEEECC ELTLGLPKPITAATGMDAFVHALESYISTKANPISDMYAMESMRLIGANIVDAYENGQSL CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCH KAREAMMLGSMYGGLALTAAGTAAVHALAYPLGGMFNVTHGVANAMLLPHVMAFNLDAIE HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH DRLANVARALDLASKADTDADAARKLIDKMEAWTAAVDIPQDLRKFGVSEAHLDALAVAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH SKVKRLLGNNPKALTLDDMKSIYRRLLP HHHHHHHCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure TTYHFQTVRHIVHGAGSLATLPDKLALLDTPVKRIALITQPSMEALGIVDRVIESLDAK CCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCCC DVDVRIIRGVEPEPTIGNVETVFNEQIAPFAPQAILSIGGGSVLDAAKLFAVRLTNDEPL CCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHEEEEEECCCHHH RNWLGIDLIKHPGVPMILVPTTAGTGSEVTPNAIVTLPDESLKVGIVSRHLLPQIVILDP HHHHCCHHHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEHHHHHHHCCEEEEECC ELTLGLPKPITAATGMDAFVHALESYISTKANPISDMYAMESMRLIGANIVDAYENGQSL CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCH KAREAMMLGSMYGGLALTAAGTAAVHALAYPLGGMFNVTHGVANAMLLPHVMAFNLDAIE HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH DRLANVARALDLASKADTDADAARKLIDKMEAWTAAVDIPQDLRKFGVSEAHLDALAVAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH SKVKRLLGNNPKALTLDDMKSIYRRLLP HHHHHHHCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]