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The map label for this gene is 107023068

Identifier: 107023068

GI number: 107023068

Start: 1684031

End: 1685161

Strand: Reverse

Name: 107023068

Synonym: Bcen_1516

Alternate gene names: NA

Gene position: 1685161-1684031 (Counterclockwise)

Preceding gene: 107023069

Following gene: 107023066

Centisome position: 51.15

GC content: 64.19

Gene sequence:

>1131_bases
ATGAAAAGAAAAGTCATCTCGGCGATCTCTCTGTCGATTACCGCCTACGCGGCCGGCGCGCATGCGCAAAGCTCGGTCAC
GCTTTACGGCATCGTCGATACCGGTATCGCATACATTCACAACAGCGGCGGACAAGCGTCGCAATGGAAGATGTCGGCCG
GTAATCTGTCCGGAAACGAATGGGGGCTCAAGGGCACCGAAGATCTCGGCGGAGGCTTGTCGGCGAGCTTCCAGCTCGAG
AACGGCTTCGATCTCGGCTCGGGTCAGTTGCAGAACGACGGCCGCATGTTCGGCCGGCAAGCGTTCGTCGGGCTGGGCAG
CACGCGTTTCGGGACGGTCACGCTCGGGCGGCAATACGATCCGGTGACCGATCTGGTTCAGCCGATCACCGCCGATTCGT
ACAGCGGCCTGTTCGCGCCGCCGGGCGATATCGACAATTACGACGACAGCGCGCGTTTCAATAGTGCGGTCAAGTGGACG
AGCCCGTCGTGGGGCGGTGTCACGGTCGAGACCATGTATGCGTTCGGCGGCGTGGCAGGATCGACGGGCTCCGGGCAAAG
CTGGTCGGCCGCGGCGGCCTACAGCGGCGGCGCGCTCAGCGTGGCGGGCGGGTTCCTGCACGTGGACAACGGCAACGCCA
GGACGTCGGCACGCGGCACGTCGAGCGCGGACAGTTTCTTCAACAGCGCCGTCAATGCGGCGTATGCCACTGCCCGCGGC
ATCGATATCGGGCGGATCGGCGCACAGTACGTCGTCGGGCCGGTCACGGCCGGCGCGGCGTACTCGTACACGCGCTATAC
GTCGGACGGCGCGTCGACGTTCGCGGGTTCGCAGCACTTCCAGAACGGCTCCGTGTTCGCGAGCTGGATGGCGACGCCGA
CGCTCCAGGTGATCGGCGGCTACAACTACACGCGTTCGGGCGGCCATTCGTCGGCGACCTATCAGCAGGTCAATCTCGGC
GTCGACTATTTGCTGAGCAAACGGACCGACGTCTATGCGATGGCCGGCTATCAGCATGCGAGCGGCGACAATGGCCAGGG
GAGCGCTCAAGCGGTGATCGGCTCTTACGACGTCAATTCGGGCGCGAATTCGCAGATCGTCGCAATCGTCGGCCTGCGCC
ACAAGTTCTGA

Upstream 100 bases:

>100_bases
CTGGATAGTTCTCCTGACGACGGGAAAGAAGCGGAGCGGTATTCGGGAGACGCATCAATACCGCTCTGATCGATGTGTAC
TTCGTGGACGGACAAGTGAA

Downstream 100 bases:

>100_bases
GCTATTCGGGGAAATCCGGCAGACAGGCTGGTCCCGCTCCGGACGGAGCGGGACGACACCGGCGACGTCAGTTGTTCTTC
GCCGCGGCTGCCAGCTTCTT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKRKVISAISLSITAYAAGAHAQSSVTLYGIVDTGIAYIHNSGGQASQWKMSAGNLSGNEWGLKGTEDLGGGLSASFQLE
NGFDLGSGQLQNDGRMFGRQAFVGLGSTRFGTVTLGRQYDPVTDLVQPITADSYSGLFAPPGDIDNYDDSARFNSAVKWT
SPSWGGVTVETMYAFGGVAGSTGSGQSWSAAAAYSGGALSVAGGFLHVDNGNARTSARGTSSADSFFNSAVNAAYATARG
IDIGRIGAQYVVGPVTAGAAYSYTRYTSDGASTFAGSQHFQNGSVFASWMATPTLQVIGGYNYTRSGGHSSATYQQVNLG
VDYLLSKRTDVYAMAGYQHASGDNGQGSAQAVIGSYDVNSGANSQIVAIVGLRHKF

Sequences:

>Translated_376_residues
MKRKVISAISLSITAYAAGAHAQSSVTLYGIVDTGIAYIHNSGGQASQWKMSAGNLSGNEWGLKGTEDLGGGLSASFQLE
NGFDLGSGQLQNDGRMFGRQAFVGLGSTRFGTVTLGRQYDPVTDLVQPITADSYSGLFAPPGDIDNYDDSARFNSAVKWT
SPSWGGVTVETMYAFGGVAGSTGSGQSWSAAAAYSGGALSVAGGFLHVDNGNARTSARGTSSADSFFNSAVNAAYATARG
IDIGRIGAQYVVGPVTAGAAYSYTRYTSDGASTFAGSQHFQNGSVFASWMATPTLQVIGGYNYTRSGGHSSATYQQVNLG
VDYLLSKRTDVYAMAGYQHASGDNGQGSAQAVIGSYDVNSGANSQIVAIVGLRHKF
>Mature_376_residues
MKRKVISAISLSITAYAAGAHAQSSVTLYGIVDTGIAYIHNSGGQASQWKMSAGNLSGNEWGLKGTEDLGGGLSASFQLE
NGFDLGSGQLQNDGRMFGRQAFVGLGSTRFGTVTLGRQYDPVTDLVQPITADSYSGLFAPPGDIDNYDDSARFNSAVKWT
SPSWGGVTVETMYAFGGVAGSTGSGQSWSAAAAYSGGALSVAGGFLHVDNGNARTSARGTSSADSFFNSAVNAAYATARG
IDIGRIGAQYVVGPVTAGAAYSYTRYTSDGASTFAGSQHFQNGSVFASWMATPTLQVIGGYNYTRSGGHSSATYQQVNLG
VDYLLSKRTDVYAMAGYQHASGDNGQGSAQAVIGSYDVNSGANSQIVAIVGLRHKF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38843; Mature: 38843

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVISAISLSITAYAAGAHAQSSVTLYGIVDTGIAYIHNSGGQASQWKMSAGNLSGNE
CCCHHEEEEEEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCC
WGLKGTEDLGGGLSASFQLENGFDLGSGQLQNDGRMFGRQAFVGLGSTRFGTVTLGRQYD
CCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCEEEEEECCCCC
PVTDLVQPITADSYSGLFAPPGDIDNYDDSARFNSAVKWTSPSWGGVTVETMYAFGGVAG
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCEEEEEEEECCCCCC
STGSGQSWSAAAAYSGGALSVAGGFLHVDNGNARTSARGTSSADSFFNSAVNAAYATARG
CCCCCCCCCCCEECCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
IDIGRIGAQYVVGPVTAGAAYSYTRYTSDGASTFAGSQHFQNGSVFASWMATPTLQVIGG
CCHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEC
YNYTRSGGHSSATYQQVNLGVDYLLSKRTDVYAMAGYQHASGDNGQGSAQAVIGSYDVNS
CCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCC
GANSQIVAIVGLRHKF
CCCCEEEEEEEECCCC
>Mature Secondary Structure
MKRKVISAISLSITAYAAGAHAQSSVTLYGIVDTGIAYIHNSGGQASQWKMSAGNLSGNE
CCCHHEEEEEEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCC
WGLKGTEDLGGGLSASFQLENGFDLGSGQLQNDGRMFGRQAFVGLGSTRFGTVTLGRQYD
CCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCEEEEEECCCCC
PVTDLVQPITADSYSGLFAPPGDIDNYDDSARFNSAVKWTSPSWGGVTVETMYAFGGVAG
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCEEEEEEEECCCCCC
STGSGQSWSAAAAYSGGALSVAGGFLHVDNGNARTSARGTSSADSFFNSAVNAAYATARG
CCCCCCCCCCCEECCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
IDIGRIGAQYVVGPVTAGAAYSYTRYTSDGASTFAGSQHFQNGSVFASWMATPTLQVIGG
CCHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEC
YNYTRSGGHSSATYQQVNLGVDYLLSKRTDVYAMAGYQHASGDNGQGSAQAVIGSYDVNS
CCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCC
GANSQIVAIVGLRHKF
CCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]