Click here to switch to the map view.

The map label for this gene is nagZ [H]

Identifier: 107023066

GI number: 107023066

Start: 1681112

End: 1682251

Strand: Reverse

Name: nagZ [H]

Synonym: Bcen_1514

Alternate gene names: 107023066

Gene position: 1682251-1681112 (Counterclockwise)

Preceding gene: 107023068

Following gene: 107023065

Centisome position: 51.06

GC content: 68.51

Gene sequence:

>1140_bases
GTGAACGATTACGATCGAGACGCTTACGCGGTTCTGTTGCCGGCATTCGCGGGCCTGACGCTCAGCGACGACGTGTGCCG
ATATCTCGACCGGGGCGGCGTGTCGGTACTGCTGGGCGAGACGCGTGACGAGTACGTCGGACGCGCGATGAGCGCGCAGC
GCCGCACGGAAGAGGCCGCCGCGCACTTCAGGGACGTCGTCGAATCGACCCGGAGGCGGGCAGGGTCGGGCGTGCTGGTG
GCCGTCGATCAGGAACTCGGCGGGATACAACGACTGCATGCGCTCGTGCCCGCGCTGCCGTCGCTCGACGACGCCTTGCA
CGCTGGCACCGAGACGATCGTTGAAAGATCCGCCGCGGTCGCCGCGGCGGCGCGCGAACTGGGCGTCAACCTGTTTCTGT
CGCCGATCGCCGATGTCGTGGTGGGCGCGAATCCCTGGCTCGACGGGCGGCATCTCGGCGCCGATGCCGCCGATGTACTA
CGCATTGCCCGCGCGTTCGTGCAGGGCGTGCAATCGGCGGGCGTCGCGGCAACCGCCAAGCATTTCCCCGGGCATCCGGT
CACGGCGCTCGATCCGGCGCTCGACGAGGCGGTCGTGGGCGGCGGGCTCGCCGAGCTCGCGCCGACGCTCGACGTGTTTC
GGGCATTGATCGCCGGCGGCGTCAAGGCGGTCATGGCGGGGCCCGCGCTGGTGCCTGCCATCGATGTCGAGCATCCATCG
AGCACGTCGCGCGATACGCTTTCGATGCTGCGGCACGAATTCTCGTTCCACGGGCTCATCATTTCCGACGATCTGGATGC
GCCCGGCATCTTGCGCGGCAGAAGCATCGAGGCCACGGCCGTCGCCGCGCTGGATGCCGGTGCCGATCTGCTGCTCCTGT
CGAGCGAAGCCGGGCTCGACCGCATTGCCGGCACGATCGTCGAAGCCGTCAGGAGCGGCGCGCTCGACGCGTCGCGGTTG
GCGCAGGCGGCCAACCGCGTGCGCGCTCGCCCGGGAACTGGATGGCGTGCAGGTCGCCGGCCGCAACGAGCGCGCGTGAG
GCGAATCGATGAGCGAACTTTTGCGCCAAGCCCATGCCGTGTTGTTTCCGGTGCTCGTGACACTCGAACTCGACGACCAC
ATCGGCCGGTTTCTCGATAA

Upstream 100 bases:

>100_bases
AGGGGGGAAACCGCCGGGTGCACCCACTGCATCGCGTGGATTCGGGCGGGCTCGGCGGCCGCCGTGACGAAATTTGCACC
TTATACAGGGGAGTCCTGCT

Downstream 100 bases:

>100_bases
CGGCGGAAAGAGCCTGCTGTTCGGCGAGACCGGCGAGGAATATGTGTCCGGCCAGATGAATGCGGAGCGCCGGCGTCGCG
AAACGCTCGATGCGTGGCAC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MNDYDRDAYAVLLPAFAGLTLSDDVCRYLDRGGVSVLLGETRDEYVGRAMSAQRRTEEAAAHFRDVVESTRRRAGSGVLV
AVDQELGGIQRLHALVPALPSLDDALHAGTETIVERSAAVAAAARELGVNLFLSPIADVVVGANPWLDGRHLGADAADVL
RIARAFVQGVQSAGVAATAKHFPGHPVTALDPALDEAVVGGGLAELAPTLDVFRALIAGGVKAVMAGPALVPAIDVEHPS
STSRDTLSMLRHEFSFHGLIISDDLDAPGILRGRSIEATAVAALDAGADLLLLSSEAGLDRIAGTIVEAVRSGALDASRL
AQAANRVRARPGTGWRAGRRPQRARVRRIDERTFAPSPCRVVSGARDTRTRRPHRPVSR

Sequences:

>Translated_379_residues
MNDYDRDAYAVLLPAFAGLTLSDDVCRYLDRGGVSVLLGETRDEYVGRAMSAQRRTEEAAAHFRDVVESTRRRAGSGVLV
AVDQELGGIQRLHALVPALPSLDDALHAGTETIVERSAAVAAAARELGVNLFLSPIADVVVGANPWLDGRHLGADAADVL
RIARAFVQGVQSAGVAATAKHFPGHPVTALDPALDEAVVGGGLAELAPTLDVFRALIAGGVKAVMAGPALVPAIDVEHPS
STSRDTLSMLRHEFSFHGLIISDDLDAPGILRGRSIEATAVAALDAGADLLLLSSEAGLDRIAGTIVEAVRSGALDASRL
AQAANRVRARPGTGWRAGRRPQRARVRRIDERTFAPSPCRVVSGARDTRTRRPHRPVSR
>Mature_379_residues
MNDYDRDAYAVLLPAFAGLTLSDDVCRYLDRGGVSVLLGETRDEYVGRAMSAQRRTEEAAAHFRDVVESTRRRAGSGVLV
AVDQELGGIQRLHALVPALPSLDDALHAGTETIVERSAAVAAAARELGVNLFLSPIADVVVGANPWLDGRHLGADAADVL
RIARAFVQGVQSAGVAATAKHFPGHPVTALDPALDEAVVGGGLAELAPTLDVFRALIAGGVKAVMAGPALVPAIDVEHPS
STSRDTLSMLRHEFSFHGLIISDDLDAPGILRGRSIEATAVAALDAGADLLLLSSEAGLDRIAGTIVEAVRSGALDASRL
AQAANRVRARPGTGWRAGRRPQRARVRRIDERTFAPSPCRVVSGARDTRTRRPHRPVSR

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=252, Percent_Identity=30.952380952381, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 39979; Mature: 39979

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYDRDAYAVLLPAFAGLTLSDDVCRYLDRGGVSVLLGETRDEYVGRAMSAQRRTEEAA
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
AHFRDVVESTRRRAGSGVLVAVDQELGGIQRLHALVPALPSLDDALHAGTETIVERSAAV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AAAARELGVNLFLSPIADVVVGANPWLDGRHLGADAADVLRIARAFVQGVQSAGVAATAK
HHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
HFPGHPVTALDPALDEAVVGGGLAELAPTLDVFRALIAGGVKAVMAGPALVPAIDVEHPS
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCCC
STSRDTLSMLRHEFSFHGLIISDDLDAPGILRGRSIEATAVAALDAGADLLLLSSEAGLD
CCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHH
RIAGTIVEAVRSGALDASRLAQAANRVRARPGTGWRAGRRPQRARVRRIDERTFAPSPCR
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHH
VVSGARDTRTRRPHRPVSR
HHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDYDRDAYAVLLPAFAGLTLSDDVCRYLDRGGVSVLLGETRDEYVGRAMSAQRRTEEAA
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
AHFRDVVESTRRRAGSGVLVAVDQELGGIQRLHALVPALPSLDDALHAGTETIVERSAAV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AAAARELGVNLFLSPIADVVVGANPWLDGRHLGADAADVLRIARAFVQGVQSAGVAATAK
HHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
HFPGHPVTALDPALDEAVVGGGLAELAPTLDVFRALIAGGVKAVMAGPALVPAIDVEHPS
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCCC
STSRDTLSMLRHEFSFHGLIISDDLDAPGILRGRSIEATAVAALDAGADLLLLSSEAGLD
CCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHH
RIAGTIVEAVRSGALDASRLAQAANRVRARPGTGWRAGRRPQRARVRRIDERTFAPSPCR
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHH
VVSGARDTRTRRPHRPVSR
HHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA