| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is czcS [H]
Identifier: 107023056
GI number: 107023056
Start: 1670370
End: 1671830
Strand: Reverse
Name: czcS [H]
Synonym: Bcen_1504
Alternate gene names: 107023056
Gene position: 1671830-1670370 (Counterclockwise)
Preceding gene: 107023057
Following gene: 107023052
Centisome position: 50.75
GC content: 71.59
Gene sequence:
>1461_bases ATGACGCGCCCGCGCTCGCTCGCCGCGACGCTCGCGCTCGCGTTCGCCGCGACCACGCTGGCCGCGTTCGCGCTCGTCGG CGCGTATGTGTATGCGGGCCTCGAGCGGCAGGTGAACACGCAGGACGATCTCGACATCGTGCTGGCCGCGCGCCACACGC GCCGGCTCGCGGGCGAGCTCGAGTCGCTCGACGCGGCGCGTGCGCACGCCGAGCGACTGACGAGCCAGGTGCTGGGCAAC GAGGCGCTGTCGATGGCCGTCGTCGATGCGGGAGGCGACGTGCTCGCGCGCCACAACGTCCGGCTCGCCGCGCTCGACGA GGCGCCGGCGGCCGCGTCGACTCCGTTGGCCGACGCGCAACTGTTCGCGCCGCACGCGGTGCCGGTTCCCGCAAACGACC GGATCACGGCCGACCGGCTCGTCACGTGGACCGCCGACGGCGGCACGCCGATGCGCGGCGTCGTGATCGAGGCCGCGCTC GGCGACCGCACGCCGATCCGCATCGCGATCGCGCGCAACATGCGCGACCGCGCCGATCTGCTCGACGGCTACCGCGACCG GCTCAAGCTCGCCGGCGGGCTCGGCGCGCTGTTCGCGCTGCTGCTCGGCTACTGGCTGATCCGCAAGGCGCTTGCGCCGC TGCGCGAGATCGTCGACGACACCGGCCGGATCACGGTCGACAAGCTCGACACGCGGCTCGACGCGTCGCGTGCGCCGCCC GAGCTGCGCGCGCTCGTCGATGCGCAGAACGCGATGCTCGGCCGCCTGCAGCAGGCGTTCGCGCATCTGTCGCAATTCAG CGCCGATCTCGCGCACGACCTGCGCACGCCGCTGAACAACATGCGCGGCGCCACCGAAGTCGCGCTCGCGCGGCCGCGTT CGGTCGACGAGTACCAGACGCTGCTCGAATCGAATCTCGAGGAATACGACCGTCTCGCGCGGATGATCGAGAACGTGCTG TTTCTCGCGCGCGCCGAGCATCCGAGTTTCGTCACGCGGCGGCGCGCGTTCGACGTGCGCGAAGAACTCGAGCGCATCGC GGAGTATTTCGAAGGGCTCGCCGACGAAGCGGGCTCGACGTTGCGCGTCGACGGGCACGGGCAGCTGACCGCCGACGTCG AGCTGTTTCGTCGCGCCGTCGGCAACCTGCTCGCGAACGCGCTGCGTTACACGCCGGCCGGCGGCGTCATCACGCTCGCC GTCGACGAAACGCCGGATGCGGTACGCGTCGTCGTCGAGAATCCGGGCGAGCCGATCGATCCTGCATTGCTGCCGCGGAT CTTCGACCGCTTCGTGCGCGGCGATCCCGCGCGCAGCGGCGGTGTACCGGGCGGCACGGCCGGGCTCGGCCTCGCGATCG TGCGCTCGGTGATGGAACTGCACGGCGGCACCGCGCAGGTCGAAAGCGACGCGCGCGGCACGCGTTTCGTGCTCACGTTC AACCGGCCGCCTGTTGCTTGA
Upstream 100 bases:
>100_bases CGATCCGGCGCCTGCGCGCGAAGATCGACGACGCGTTTCCCGTCAAGCTGATCCATACCGTGCGCGGCGTCGGCTACGTG CTCGAACCGAAGGACGACGC
Downstream 100 bases:
>100_bases CGGCGGCGGGTTGGGGCCGCGCGGTTGCCGCGGCGTCCTTCTTGCCGGTGTTCGATTCCGCGTCTGCCCCGGCGCTCGCG CTCGCCTGCCAGCCGCCGCC
Product: heavy metal sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTRPRSLAATLALAFAATTLAAFALVGAYVYAGLERQVNTQDDLDIVLAARHTRRLAGELESLDAARAHAERLTSQVLGN EALSMAVVDAGGDVLARHNVRLAALDEAPAAASTPLADAQLFAPHAVPVPANDRITADRLVTWTADGGTPMRGVVIEAAL GDRTPIRIAIARNMRDRADLLDGYRDRLKLAGGLGALFALLLGYWLIRKALAPLREIVDDTGRITVDKLDTRLDASRAPP ELRALVDAQNAMLGRLQQAFAHLSQFSADLAHDLRTPLNNMRGATEVALARPRSVDEYQTLLESNLEEYDRLARMIENVL FLARAEHPSFVTRRRAFDVREELERIAEYFEGLADEAGSTLRVDGHGQLTADVELFRRAVGNLLANALRYTPAGGVITLA VDETPDAVRVVVENPGEPIDPALLPRIFDRFVRGDPARSGGVPGGTAGLGLAIVRSVMELHGGTAQVESDARGTRFVLTF NRPPVA
Sequences:
>Translated_486_residues MTRPRSLAATLALAFAATTLAAFALVGAYVYAGLERQVNTQDDLDIVLAARHTRRLAGELESLDAARAHAERLTSQVLGN EALSMAVVDAGGDVLARHNVRLAALDEAPAAASTPLADAQLFAPHAVPVPANDRITADRLVTWTADGGTPMRGVVIEAAL GDRTPIRIAIARNMRDRADLLDGYRDRLKLAGGLGALFALLLGYWLIRKALAPLREIVDDTGRITVDKLDTRLDASRAPP ELRALVDAQNAMLGRLQQAFAHLSQFSADLAHDLRTPLNNMRGATEVALARPRSVDEYQTLLESNLEEYDRLARMIENVL FLARAEHPSFVTRRRAFDVREELERIAEYFEGLADEAGSTLRVDGHGQLTADVELFRRAVGNLLANALRYTPAGGVITLA VDETPDAVRVVVENPGEPIDPALLPRIFDRFVRGDPARSGGVPGGTAGLGLAIVRSVMELHGGTAQVESDARGTRFVLTF NRPPVA >Mature_485_residues TRPRSLAATLALAFAATTLAAFALVGAYVYAGLERQVNTQDDLDIVLAARHTRRLAGELESLDAARAHAERLTSQVLGNE ALSMAVVDAGGDVLARHNVRLAALDEAPAAASTPLADAQLFAPHAVPVPANDRITADRLVTWTADGGTPMRGVVIEAALG DRTPIRIAIARNMRDRADLLDGYRDRLKLAGGLGALFALLLGYWLIRKALAPLREIVDDTGRITVDKLDTRLDASRAPPE LRALVDAQNAMLGRLQQAFAHLSQFSADLAHDLRTPLNNMRGATEVALARPRSVDEYQTLLESNLEEYDRLARMIENVLF LARAEHPSFVTRRRAFDVREELERIAEYFEGLADEAGSTLRVDGHGQLTADVELFRRAVGNLLANALRYTPAGGVITLAV DETPDAVRVVVENPGEPIDPALLPRIFDRFVRGDPARSGGVPGGTAGLGLAIVRSVMELHGGTAQVESDARGTRFVLTFN RPPVA
Specific function: Member of the two-component regulatory system CzcS/CzcR involved in the control of cobalt, zinc and cadmium homeostasis. Probably activates CzcR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=323, Percent_Identity=39.6284829721362, Blast_Score=239, Evalue=4e-64, Organism=Escherichia coli, GI1788279, Length=315, Percent_Identity=31.7460317460317, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1786600, Length=213, Percent_Identity=30.0469483568075, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790551, Length=298, Percent_Identity=29.5302013422819, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1788393, Length=263, Percent_Identity=26.2357414448669, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790861, Length=280, Percent_Identity=29.6428571428571, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790346, Length=272, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1789403, Length=250, Percent_Identity=30.4, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786912, Length=225, Percent_Identity=28.8888888888889, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1789149, Length=337, Percent_Identity=24.3323442136499, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=246, Percent_Identity=30.8943089430894, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788549, Length=241, Percent_Identity=28.2157676348548, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1789808, Length=235, Percent_Identity=29.7872340425532, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=26.2008733624454, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788713, Length=248, Percent_Identity=22.5806451612903, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52446; Mature: 52315
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPRSLAATLALAFAATTLAAFALVGAYVYAGLERQVNTQDDLDIVLAARHTRRLAGEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ESLDAARAHAERLTSQVLGNEALSMAVVDAGGDVLARHNVRLAALDEAPAAASTPLADAQ HHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEECCEEEEEECCCCCCCCCCCCCHH LFAPHAVPVPANDRITADRLVTWTADGGTPMRGVVIEAALGDRTPIRIAIARNMRDRADL HCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHH LDGYRDRLKLAGGLGALFALLLGYWLIRKALAPLREIVDDTGRITVDKLDTRLDASRAPP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCH ELRALVDAQNAMLGRLQQAFAHLSQFSADLAHDLRTPLNNMRGATEVALARPRSVDEYQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHH LLESNLEEYDRLARMIENVLFLARAEHPSFVTRRRAFDVREELERIAEYFEGLADEAGST HHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LRVDGHGQLTADVELFRRAVGNLLANALRYTPAGGVITLAVDETPDAVRVVVENPGEPID EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCC PALLPRIFDRFVRGDPARSGGVPGGTAGLGLAIVRSVMELHGGTAQVESDARGTRFVLTF HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEE NRPPVA CCCCCC >Mature Secondary Structure TRPRSLAATLALAFAATTLAAFALVGAYVYAGLERQVNTQDDLDIVLAARHTRRLAGEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ESLDAARAHAERLTSQVLGNEALSMAVVDAGGDVLARHNVRLAALDEAPAAASTPLADAQ HHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEECCEEEEEECCCCCCCCCCCCCHH LFAPHAVPVPANDRITADRLVTWTADGGTPMRGVVIEAALGDRTPIRIAIARNMRDRADL HCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHH LDGYRDRLKLAGGLGALFALLLGYWLIRKALAPLREIVDDTGRITVDKLDTRLDASRAPP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCH ELRALVDAQNAMLGRLQQAFAHLSQFSADLAHDLRTPLNNMRGATEVALARPRSVDEYQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHH LLESNLEEYDRLARMIENVLFLARAEHPSFVTRRRAFDVREELERIAEYFEGLADEAGST HHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LRVDGHGQLTADVELFRRAVGNLLANALRYTPAGGVITLAVDETPDAVRVVVENPGEPID EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCC PALLPRIFDRFVRGDPARSGGVPGGTAGLGLAIVRSVMELHGGTAQVESDARGTRFVLTF HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEE NRPPVA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9044283 [H]