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The map label for this gene is yecS [H]

Identifier: 107023048

GI number: 107023048

Start: 1659211

End: 1659861

Strand: Reverse

Name: yecS [H]

Synonym: Bcen_1496

Alternate gene names: 107023048

Gene position: 1659861-1659211 (Counterclockwise)

Preceding gene: 107023049

Following gene: 107023047

Centisome position: 50.38

GC content: 64.98

Gene sequence:

>651_bases
ATGACCGATTTCACATTGGGGCAGATTCTCGCGAACCTGCTGCTGGCCGCGCGCTGGACGATCGTGCTGTCGATCGTGTC
GTTCGTGACGGGCGGCCTCGTCGGCCTCGGGCTGCTCGTGATGCGCGTGTCGGGCTCGACGGTGCTGCGCGGCATCGCGA
AGCTCTATATCGAAGTGTTCCAGGGCACCCCGTTGCTGATGCAGCTGTTCATCGTGTTCTTCGGCCTGCCGCTCGTCGGG
CTCGACGTGCCGCCGTGGGTCGCGGCCACGGCGGGGCTCACGTTCTTCACCAGCGCGTATCTGGCCGAGATCTGGCGCGG
CTGTGTCGAGGCCGTGCCGAAAGGGCAGTGGGAGGCGTCGGCCAGCCTGGCGATGAGCTACGTCGAGCAATTGCGTCACG
TGATCCTGCCGCAGGCCGCGCGCATCGCGATCGCGCCGACGGTCGGTTTCGGCGTGCAGGCCGTGAAGGATACGGCGCTG
GTGTCGATCATCGGCTTCACCGAGCTGACGAAGGTCGGCATCGCGATCTCGAACGCGACGTTCCGGCCGTTCGTCGTGTA
TGGCCTCGTCGCGCTGATCTATTTCGCGCTCTGTTATCCGCTTACCCGTTATGCGCGCACGTTGCAAAGGAGATGGCATG
CCGCTCGTTGA

Upstream 100 bases:

>100_bases
TCGTGATCACGCTCGCGTATCTGGCGATGGCGCTGCTGCTGCGCGCCACCCTCGGCGCGATGGGCCGCCGCCTGTTCACC
CGCCGCGTGCGAGGTGCGCG

Downstream 100 bases:

>100_bases
AACCCGGGGTCTCGAAAAGAACTTCGGCACCCACCATGTGCTCAAGGGCATCGATTTCTCCGTCGAGCGCGGGCAGGTCG
TCTCGATCATCGGCCGCAGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTDFTLGQILANLLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGIAKLYIEVFQGTPLLMQLFIVFFGLPLVG
LDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTAL
VSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTLQRRWHAAR

Sequences:

>Translated_216_residues
MTDFTLGQILANLLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGIAKLYIEVFQGTPLLMQLFIVFFGLPLVG
LDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTAL
VSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTLQRRWHAAR
>Mature_215_residues
TDFTLGQILANLLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGIAKLYIEVFQGTPLLMQLFIVFFGLPLVGL
DVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTALV
SIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTLQRRWHAAR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=38.8059701492537, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=33.8308457711443, Blast_Score=107, Evalue=4e-25,
Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=35.0961538461538, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=30.2884615384615, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1786874, Length=163, Percent_Identity=28.2208588957055, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788646, Length=207, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1786873, Length=200, Percent_Identity=25.5, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI48994930, Length=90, Percent_Identity=38.8888888888889, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787087, Length=174, Percent_Identity=30.4597701149425, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23479; Mature: 23348

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFTLGQILANLLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGIAKLYIEVF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGTPLLMQLFIVFFGLPLVGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEAS
CCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNAT
HHHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FRPFVVYGLVALIYFALCYPLTRYARTLQRRWHAAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDFTLGQILANLLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGIAKLYIEVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGTPLLMQLFIVFFGLPLVGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEAS
CCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNAT
HHHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FRPFVVYGLVALIYFALCYPLTRYARTLQRRWHAAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]