| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023043
Identifier: 107023043
GI number: 107023043
Start: 1655227
End: 1655463
Strand: Reverse
Name: 107023043
Synonym: Bcen_1491
Alternate gene names: NA
Gene position: 1655463-1655227 (Counterclockwise)
Preceding gene: 107023046
Following gene: 107023042
Centisome position: 50.25
GC content: 70.04
Gene sequence:
>237_bases ATGTCTTACCTGATCTCACCGGGAGCCGGCGTCGCAGTCGGTCTCCTGCACCCCCTCGTGCGCGTGCAGTCGCCCGCGCC GCCGCTGATCGCTCTGGCGCGCCTGTTCGGCATCGTCGTCCGCGAGCATGCGATCCCGCTCGTGCCGGCGCCGTTTCGTG CGCTCGCCGCGCAGGCCCGCGATGCGGACACCATCGACACAACCGCGGAAGCCACGACATGCAGCCCGCGCAAGTAA
Upstream 100 bases:
>100_bases CATGACTTTCAGGGCCGCGTTCCGTAGTCTTGTTCCCGAGCCGCCGCACGAGGCCGAAGCCCTTCGGCCGGCCCGGCCGG CGGCACAACCGGAACGGACC
Downstream 100 bases:
>100_bases CGGCAGCGGGCGCGGCGGCCCCCGATCGCGTGCGCGGCGAGGACGTGTTTCTCGCCTCGATCGCCGGCTACGTCGACACG CTCGGCTTCGTCGCGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSYLISPGAGVAVGLLHPLVRVQSPAPPLIALARLFGIVVREHAIPLVPAPFRALAAQARDADTIDTTAEATTCSPRK
Sequences:
>Translated_78_residues MSYLISPGAGVAVGLLHPLVRVQSPAPPLIALARLFGIVVREHAIPLVPAPFRALAAQARDADTIDTTAEATTCSPRK >Mature_77_residues SYLISPGAGVAVGLLHPLVRVQSPAPPLIALARLFGIVVREHAIPLVPAPFRALAAQARDADTIDTTAEATTCSPRK
Specific function: Unknown
COG id: COG4317
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8139; Mature: 8007
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLISPGAGVAVGLLHPLVRVQSPAPPLIALARLFGIVVREHAIPLVPAPFRALAAQAR CCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC DADTIDTTAEATTCSPRK CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SYLISPGAGVAVGLLHPLVRVQSPAPPLIALARLFGIVVREHAIPLVPAPFRALAAQAR CEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC DADTIDTTAEATTCSPRK CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA