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The map label for this gene is ycaC [H]

Identifier: 107023039

GI number: 107023039

Start: 1652014

End: 1652700

Strand: Reverse

Name: ycaC [H]

Synonym: Bcen_1487

Alternate gene names: 107023039

Gene position: 1652700-1652014 (Counterclockwise)

Preceding gene: 107023042

Following gene: 107023038

Centisome position: 50.16

GC content: 63.9

Gene sequence:

>687_bases
ATGAGCAACCCCAAGCTTGAAGTACTTACCCCGCACAACAGCCAACTGATCTTCATCGATCAGCAGCCGCAGATGGCGTT
CGGCGTGCAGTCGATCGATCGGCAGACGCTGAAGAACAACGTCGTCGGGCTCGCGAAGGCCGCGAAGGTCTTCAACATCC
CCACCACGATCACGACGGTCGAAAGCGAGAGCTTCTCGGGCCACACCTATCCCGAGCTGCTCGACGTGTTCCCGAACCAG
AAGACGCTCGAACGCACGTCGATGAACTCGTGGGACGACCAGAAGGTGCGCGACGCGCTCGCCGCGAACGGCCGCAAGAA
GGTGGTCGTGTCGGGCCTGTGGACCGAAGTCTGCAATACGACGTTCGCGCTCTGCGCGATGCTCGAAGGCGACTACGAGA
TCTACATGGTCTCCGACGCATCGGGCGGCACGACGCAGGCCGCGCACGATATCGCGATGCAGCGCATGGTCCAGGCCGGC
GTCGTGCCGGTCACGTGGCAGCAGGTCCTGCTCGAATGGCAGCGCGACTGGGCACGCCGCGAGACGTATGACGCGGTGAT
GGCGATCGCGAAGGAGCACTCGGGCGCCTACGGGATGGGCGTGGACTATGCGTACACGATGCTCCACAAGGCACCGCAGC
GCACCGCGACGCCGCACGAGTCGATTGCGCCCGTGCCGGCGAAGTAA

Upstream 100 bases:

>100_bases
AGGCCGACTGCCGACGCTTCCGACACAGCGCATTGGATGCCTCGCGGATGCGTCGGCCAGGCAAGCCTCATTTTTCTCCG
CGTCAAAGGACATCACCATC

Downstream 100 bases:

>100_bases
GCACAGACGACCGGCAACCGCCGATGCCGGTGCGGCGGGTTCGAGGTGAACGCGTCGCATGGGCTCCCTTGCCGCGGGCG
GCGGACGTGACGAAACACGA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSNPKLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTVESESFSGHTYPELLDVFPNQ
KTLERTSMNSWDDQKVRDALAANGRKKVVVSGLWTEVCNTTFALCAMLEGDYEIYMVSDASGGTTQAAHDIAMQRMVQAG
VVPVTWQQVLLEWQRDWARRETYDAVMAIAKEHSGAYGMGVDYAYTMLHKAPQRTATPHESIAPVPAK

Sequences:

>Translated_228_residues
MSNPKLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTVESESFSGHTYPELLDVFPNQ
KTLERTSMNSWDDQKVRDALAANGRKKVVVSGLWTEVCNTTFALCAMLEGDYEIYMVSDASGGTTQAAHDIAMQRMVQAG
VVPVTWQQVLLEWQRDWARRETYDAVMAIAKEHSGAYGMGVDYAYTMLHKAPQRTATPHESIAPVPAK
>Mature_227_residues
SNPKLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTVESESFSGHTYPELLDVFPNQK
TLERTSMNSWDDQKVRDALAANGRKKVVVSGLWTEVCNTTFALCAMLEGDYEIYMVSDASGGTTQAAHDIAMQRMVQAGV
VPVTWQQVLLEWQRDWARRETYDAVMAIAKEHSGAYGMGVDYAYTMLHKAPQRTATPHESIAPVPAK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=198, Percent_Identity=32.3232323232323, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25320; Mature: 25189

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPKLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTV
CCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEE
ESESFSGHTYPELLDVFPNQKTLERTSMNSWDDQKVRDALAANGRKKVVVSGLWTEVCNT
CCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHH
TFALCAMLEGDYEIYMVSDASGGTTQAAHDIAMQRMVQAGVVPVTWQQVLLEWQRDWARR
HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ETYDAVMAIAKEHSGAYGMGVDYAYTMLHKAPQRTATPHESIAPVPAK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNPKLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTV
CCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEE
ESESFSGHTYPELLDVFPNQKTLERTSMNSWDDQKVRDALAANGRKKVVVSGLWTEVCNT
CCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHH
TFALCAMLEGDYEIYMVSDASGGTTQAAHDIAMQRMVQAGVVPVTWQQVLLEWQRDWARR
HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ETYDAVMAIAKEHSGAYGMGVDYAYTMLHKAPQRTATPHESIAPVPAK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]