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The map label for this gene is araC [C]

Identifier: 107023010

GI number: 107023010

Start: 1614675

End: 1615580

Strand: Reverse

Name: araC [C]

Synonym: Bcen_1458

Alternate gene names: 107023010

Gene position: 1615580-1614675 (Counterclockwise)

Preceding gene: 107023012

Following gene: 107023009

Centisome position: 49.04

GC content: 66.23

Gene sequence:

>906_bases
ATGAGCGCCCCTCAGCCGGATACCGCATCGTCCGATTTCATCCCCGCCGACGTCAGGCAGACCGTCGTCACGCAAGCGTT
GCCGAACGGGCAAATCGGTATCGTCCGGCTCAAGACCTTGCGCAGGAACATGGGGCTGACCGCGCCCTATGAACTCGAGA
ATACGGATCTGATCGTGCTGCAGTTGCACCCGTTCGGCGAGCAGGATCTGTGGCTCGACGGCCGCCCCGCACCGTTCGTT
CCGTATGACGCGGGAACCGTGTCGATCTACGATCTCGACCGTCGCTGGGTGGCCGATCTCCAGGGCGCGTTCGATTGCCT
GCATTTCCATCTGCCGCGCCACACGCTCGAGGAAACGGTCGACGACCTCGGCGGCCGGCAGCGGCCGCAGCTTTATCTGC
CGCCGCATCTGAGCACCCACGATTCGGTCATCCATGCGCTCGGACACGCGCTGCTGCCCGCGCTGGCCCGGCCCGCTGAA
GCGTCCCAGATCTTCATCGATCACGTGGGGCTGGCGTTTCAGGCGCACGTCGCGCATCGTTACGGCGGCGTCGGCGAACG
GCGGGAAAGGTCGGACGGCAAGCTCACGCCGTCGCAGGCGCGCCGCGCGAAGGAGTTGCTGCTCGCGCACCTCGACGGCA
ACATCGGCCTGGCCGACGTGGCGAGCGCGTGCGGGCTGTCGCGCGGCCATTTCGTCAAGGCGTTTCATCGAACGACCGGG
CTGCCGCCGCATCGCTGGCTCATCGTGCAGCGCGTCGAACGGGCGAAGGAATGGATGCGCGACCCGAACATGCCGTTGAG
CATGATCGCCGTTGCGTGCGGCTTCGCCGATCAGAGCCATTTCTCGCGAACGTTTACGCGGTTGACCGGTGTCACGCCTC
GTCGGTGGCGCGCGGACCACACGTGA

Upstream 100 bases:

>100_bases
CTGGCGCATCATACCAGTGCGGGGTGCGGCGCGAGCAGCGTGCGTCGCCGCGATTTGCTAGAGTGATAAGCCTCGTTCAT
TCAGCTTCCCGCCTCGCCCC

Downstream 100 bases:

>100_bases
TCGTCGCGACGCGGATGCGGGGCGCGGCATGACAACCGCGGCGACGTGCAGGCATGCAACTTGCGCGGCCGCACGGGCCG
CACTACTTTGGAGAGATTTC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; AraC-Family Transcriptional Regulator; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Transcriptional Regulator Protein AraC Family; AraC Family Regulatory Protein; Transcriptional Regulatory Protein; AraC Family Transcription Regulator Protein; Transcription Regulator Protein; Transcriptional Regulator AraC; Two Component System Response Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC-Type; Helix-Turn-Helix AraC Type; AraC-Type Trancriptional Regulator; AraC Family Helix-Turn-Helix Transcriptional Regulator; Transcription Regulator; Transcriptional Activator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator AraC/XylS Family; Transcription Regulator AraC Family; Xyls/AraC-Type Transcriptional Activator; HTH-Type Transcriptional Regulator ChbR

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSAPQPDTASSDFIPADVRQTVVTQALPNGQIGIVRLKTLRRNMGLTAPYELENTDLIVLQLHPFGEQDLWLDGRPAPFV
PYDAGTVSIYDLDRRWVADLQGAFDCLHFHLPRHTLEETVDDLGGRQRPQLYLPPHLSTHDSVIHALGHALLPALARPAE
ASQIFIDHVGLAFQAHVAHRYGGVGERRERSDGKLTPSQARRAKELLLAHLDGNIGLADVASACGLSRGHFVKAFHRTTG
LPPHRWLIVQRVERAKEWMRDPNMPLSMIAVACGFADQSHFSRTFTRLTGVTPRRWRADHT

Sequences:

>Translated_301_residues
MSAPQPDTASSDFIPADVRQTVVTQALPNGQIGIVRLKTLRRNMGLTAPYELENTDLIVLQLHPFGEQDLWLDGRPAPFV
PYDAGTVSIYDLDRRWVADLQGAFDCLHFHLPRHTLEETVDDLGGRQRPQLYLPPHLSTHDSVIHALGHALLPALARPAE
ASQIFIDHVGLAFQAHVAHRYGGVGERRERSDGKLTPSQARRAKELLLAHLDGNIGLADVASACGLSRGHFVKAFHRTTG
LPPHRWLIVQRVERAKEWMRDPNMPLSMIAVACGFADQSHFSRTFTRLTGVTPRRWRADHT
>Mature_300_residues
SAPQPDTASSDFIPADVRQTVVTQALPNGQIGIVRLKTLRRNMGLTAPYELENTDLIVLQLHPFGEQDLWLDGRPAPFVP
YDAGTVSIYDLDRRWVADLQGAFDCLHFHLPRHTLEETVDDLGGRQRPQLYLPPHLSTHDSVIHALGHALLPALARPAEA
SQIFIDHVGLAFQAHVAHRYGGVGERRERSDGKLTPSQARRAKELLLAHLDGNIGLADVASACGLSRGHFVKAFHRTTGL
PPHRWLIVQRVERAKEWMRDPNMPLSMIAVACGFADQSHFSRTFTRLTGVTPRRWRADHT

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33599; Mature: 33467

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPQPDTASSDFIPADVRQTVVTQALPNGQIGIVRLKTLRRNMGLTAPYELENTDLIVL
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCEEECCCCEEEE
QLHPFGEQDLWLDGRPAPFVPYDAGTVSIYDLDRRWVADLQGAFDCLHFHLPRHTLEETV
EECCCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHH
DDLGGRQRPQLYLPPHLSTHDSVIHALGHALLPALARPAEASQIFIDHVGLAFQAHVAHR
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YGGVGERRERSDGKLTPSQARRAKELLLAHLDGNIGLADVASACGLSRGHFVKAFHRTTG
HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCC
LPPHRWLIVQRVERAKEWMRDPNMPLSMIAVACGFADQSHFSRTFTRLTGVTPRRWRADH
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
T
C
>Mature Secondary Structure 
SAPQPDTASSDFIPADVRQTVVTQALPNGQIGIVRLKTLRRNMGLTAPYELENTDLIVL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCEEECCCCEEEE
QLHPFGEQDLWLDGRPAPFVPYDAGTVSIYDLDRRWVADLQGAFDCLHFHLPRHTLEETV
EECCCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHH
DDLGGRQRPQLYLPPHLSTHDSVIHALGHALLPALARPAEASQIFIDHVGLAFQAHVAHR
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YGGVGERRERSDGKLTPSQARRAKELLLAHLDGNIGLADVASACGLSRGHFVKAFHRTTG
HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCC
LPPHRWLIVQRVERAKEWMRDPNMPLSMIAVACGFADQSHFSRTFTRLTGVTPRRWRADH
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA