Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107022996

Identifier: 107022996

GI number: 107022996

Start: 1599798

End: 1600124

Strand: Reverse

Name: 107022996

Synonym: Bcen_1444

Alternate gene names: NA

Gene position: 1600124-1599798 (Counterclockwise)

Preceding gene: 107022997

Following gene: 107022995

Centisome position: 48.57

GC content: 64.83

Gene sequence:

>327_bases
ATGAAGCAAACCTTGTATTGCACCGCCCGGACCGCGCTGGCCGTCACCGTCGCTGGCCTCGTGCTCGCCGCGTGCGGCTC
GACGCAGATGAACATGGTCGACGTCCAGACGTCGACCGCGAAGACGCTCGGGCTCGCGTCGTCGGACGAGATCACGATCG
CCAACGTCCAGTACGGGAAGAAGGACGGGCTGGGCGGCCAGAAGGTGAGTTACGACGCGACGACCGGCAAGGGGCGGCGT
TTCGGCTGTACGGTGTTCATGATTCCGGGGCTCACGCCGATCGATCGGCCGACGTACAACAACTGGGAATGCCATCCGCA
GCGGTGA

Upstream 100 bases:

>100_bases
CTGGCAATCGTATGTCGCGACGATCGGCAGCCAGATCCAGGCCAGTTTTTATACGCCGGGCACGTAAGCGCCTCGTATTG
GGGAAATCGAAGGAGAAACC

Downstream 100 bases:

>100_bases
TGGCCGCGATGACGACCACGCCCGGCGTCGGGCGTCGGTCGATCGCTTAGGGGGACGATGCACCGCGTGGGCCTTGCGCC
GACGCAGTTTGGTCCGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKQTLYCTARTALAVTVAGLVLAACGSTQMNMVDVQTSTAKTLGLASSDEITIANVQYGKKDGLGGQKVSYDATTGKGRR
FGCTVFMIPGLTPIDRPTYNNWECHPQR

Sequences:

>Translated_108_residues
MKQTLYCTARTALAVTVAGLVLAACGSTQMNMVDVQTSTAKTLGLASSDEITIANVQYGKKDGLGGQKVSYDATTGKGRR
FGCTVFMIPGLTPIDRPTYNNWECHPQR
>Mature_108_residues
MKQTLYCTARTALAVTVAGLVLAACGSTQMNMVDVQTSTAKTLGLASSDEITIANVQYGKKDGLGGQKVSYDATTGKGRR
FGCTVFMIPGLTPIDRPTYNNWECHPQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11563; Mature: 11563

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTLYCTARTALAVTVAGLVLAACGSTQMNMVDVQTSTAKTLGLASSDEITIANVQYGK
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCEEEEEECCCC
KDGLGGQKVSYDATTGKGRRFGCTVFMIPGLTPIDRPTYNNWECHPQR
CCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MKQTLYCTARTALAVTVAGLVLAACGSTQMNMVDVQTSTAKTLGLASSDEITIANVQYGK
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCEEEEEECCCC
KDGLGGQKVSYDATTGKGRRFGCTVFMIPGLTPIDRPTYNNWECHPQR
CCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA