| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is feaR [C]
Identifier: 107022995
GI number: 107022995
Start: 1598597
End: 1599649
Strand: Reverse
Name: feaR [C]
Synonym: Bcen_1443
Alternate gene names: 107022995
Gene position: 1599649-1598597 (Counterclockwise)
Preceding gene: 107022996
Following gene: 107022992
Centisome position: 48.55
GC content: 68.28
Gene sequence:
>1053_bases ATGGATCAAGCTGCATTTGTCCCTGTTTTCAGGTTCCGCACGACCGACTATCCCGAGCCGGACCGGTTCCACGTCTGGGT CAAGGACATGCTGTGCGACTACCGGCTCGACGACGACGGCGGCCACGGCCCGTGCGACGCGGAAGCAACCGGCGCGGCGC TCGGCCCGCTGATCTTGTCCGGCCGGCACTGGCACTCGCGCGCGCCGACCTATACGGTGCGCCGCACGCCGCGGCGAATC CGGCTCGACGGGCAGGATTCGATCCGCTTCACGCTGCTGCTCGGCGGGCGGCTGGCGAGCCATACCGGCGGGCCCGAATT GATCAAGGGCGCCGGCGACCTGTTCGTCTACGACGTCGCGCAGATCAACGACTGCAAGGTCGAGGCCGGCGACGTGATCA GCCTCGTCGTGCCCCGCTATCTGCTGCCGGCCCATGCAGCCCAGGCGCACGGCCAGACGCTGACGAGCGGCGTGGGCCGG CTGGTCGCCGACCAGATGCTGTCGCTGTTCCGCAACCTGCCGAACCTGCGCATGCAGGACGTGCCCAGCATCGTCCAGTC GATGCTGTTGCTGCTGGCCGCGGCGGTGTCGCCGAGCGCGCAGGCGTTGAACGACGCACGCGGCCCGATCGACCATGCGC TGGTCGATCGCGTGCGTCGCTACATCGACCTGCATTTGCTGGAGCCGGACCTCACGCCCGAACGGATCTGCCGCGACATC GGCGTGTCGCGGGCGCGGCTCTATCAGTTGTTCAAGGAAGAGGGCGGCGTGATGCGGCAGATCACGCGGCGGCGCTTGCG TCACGCGTATCACGTGCTCGGCGATCCGCAGCGCCGGCATCAGCGCATTGCGGAAATCGCGTGGGCGCACGGCTTTCCCG ACGAGAAATATTTTCACCGGTTGTTCAAGGCGGAATTCGGCCACACGCCGAAGGAGACGCTCGAGTGCGCGGCCGCGCCG ATCCTGCTGCCGTGCGGTGCAACCGATGCGCGCTGGGGCGACGGCGGCCGGCTGGCGGGATGGACGCTGCCGTTCGGGGT GCTCACCAACTGA
Upstream 100 bases:
>100_bases AGGGGGACGATGCACCGCGTGGGCCTTGCGCCGACGCAGTTTGGTCCGATAATTGACGAACCGATTCTTTCCTGACCCGC CGGTTCGATAAAAAACTGTC
Downstream 100 bases:
>100_bases GCCTGACGCGCGTGAGCATCGCGCGGTGAACGCGCGCTAGCGCATCACGCACAGACGCTGCTGGCGATGCCGCCGTCATC CATCTCGTCGAGCACGGCGC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; Helix-Turn-Helix AraC Type; Transcriptional Regulator AraC Family Protein; AraC Domain-Containing Protein; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator Transcription Regulator Protein
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MDQAAFVPVFRFRTTDYPEPDRFHVWVKDMLCDYRLDDDGGHGPCDAEATGAALGPLILSGRHWHSRAPTYTVRRTPRRI RLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVAQINDCKVEAGDVISLVVPRYLLPAHAAQAHGQTLTSGVGR LVADQMLSLFRNLPNLRMQDVPSIVQSMLLLLAAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDI GVSRARLYQLFKEEGGVMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHRLFKAEFGHTPKETLECAAAP ILLPCGATDARWGDGGRLAGWTLPFGVLTN
Sequences:
>Translated_350_residues MDQAAFVPVFRFRTTDYPEPDRFHVWVKDMLCDYRLDDDGGHGPCDAEATGAALGPLILSGRHWHSRAPTYTVRRTPRRI RLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVAQINDCKVEAGDVISLVVPRYLLPAHAAQAHGQTLTSGVGR LVADQMLSLFRNLPNLRMQDVPSIVQSMLLLLAAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDI GVSRARLYQLFKEEGGVMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHRLFKAEFGHTPKETLECAAAP ILLPCGATDARWGDGGRLAGWTLPFGVLTN >Mature_350_residues MDQAAFVPVFRFRTTDYPEPDRFHVWVKDMLCDYRLDDDGGHGPCDAEATGAALGPLILSGRHWHSRAPTYTVRRTPRRI RLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVAQINDCKVEAGDVISLVVPRYLLPAHAAQAHGQTLTSGVGR LVADQMLSLFRNLPNLRMQDVPSIVQSMLLLLAAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDI GVSRARLYQLFKEEGGVMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHRLFKAEFGHTPKETLECAAAP ILLPCGATDARWGDGGRLAGWTLPFGVLTN
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39067; Mature: 39067
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQAAFVPVFRFRTTDYPEPDRFHVWVKDMLCDYRLDDDGGHGPCDAEATGAALGPLILS CCCCCEEEEEEEECCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC GRHWHSRAPTYTVRRTPRRIRLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVA CCCCCCCCCEEEEECCCCEEEECCCCCEEEEEEECCCHHCCCCCHHHHHCCCCEEEEEEC QINDCKVEAGDVISLVVPRYLLPAHAAQAHGQTLTSGVGRLVADQMLSLFRNLPNLRMQD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VPSIVQSMLLLLAAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDI HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH GVSRARLYQLFKEEGGVMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH LFKAEFGHTPKETLECAAAPILLPCGATDARWGDGGRLAGWTLPFGVLTN HHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEECEECCCCCCCC >Mature Secondary Structure MDQAAFVPVFRFRTTDYPEPDRFHVWVKDMLCDYRLDDDGGHGPCDAEATGAALGPLILS CCCCCEEEEEEEECCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC GRHWHSRAPTYTVRRTPRRIRLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVA CCCCCCCCCEEEEECCCCEEEECCCCCEEEEEEECCCHHCCCCCHHHHHCCCCEEEEEEC QINDCKVEAGDVISLVVPRYLLPAHAAQAHGQTLTSGVGRLVADQMLSLFRNLPNLRMQD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VPSIVQSMLLLLAAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDI HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH GVSRARLYQLFKEEGGVMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH LFKAEFGHTPKETLECAAAPILLPCGATDARWGDGGRLAGWTLPFGVLTN HHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEECEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA