| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is menB [H]
Identifier: 107022981
GI number: 107022981
Start: 1582138
End: 1582941
Strand: Reverse
Name: menB [H]
Synonym: Bcen_1429
Alternate gene names: 107022981
Gene position: 1582941-1582138 (Counterclockwise)
Preceding gene: 107022982
Following gene: 107022980
Centisome position: 48.05
GC content: 66.42
Gene sequence:
>804_bases ATGAACTATGAGGACATTCTGTATCGCGAAGCGGGCGGCGTGGCGACGATCACGATCAACCGTCCGTCGGTGTACAACGC GTTCCGCGCCAGGACGGTCGACGAACTGCTGCATGCCTTTCAGCAGGCGGGCTGGAATCGCGAGATCGGCGTGATCGTGC TGACCGGCGCCGGCGAAAAGGCCTTTTGCACCGGCGGCGACCAGACGAGCCACGGCGATGGCGGCTACGGTGGCCGCGGC GCGATCGGCTTGCCCGTGGACGAGTTGCAGAGCCTCATTCGCGACGTGCCGAAGCCGGTGATCGCGCGCGTCAACGGCTA TGCGATCGGCGGCGGCAACGTGCTCGTGACGGTGTGCGACCTGGCGATCGCGAGCGAAGCGGCCCAGCTCGGGCAGGTGG GGCCCAGGGTGGGGTCGGTGGATCCCGGCTTCGGCACGGCGCTGCTCGCACGTGTCCTCGGCGAAAAACGCGCGCGGGAA GTGTGGTTCCTGTGCCGGCGCTACACGGCGCGCGAAGCGCTTGCAATGGGGTGGCTCAATGCGGTCGTGCCTGCCGATCA GCTCGACGGGGAAGTCGCGCGATGGTGCGACGAAATCCTTGCACTGAGCCCCACGGCGCTGGCGATCGCCAAGCGGTCGT TCAACGCGGATTCCGAGAACATTCGCGCGATCGGTGCGCTGGGATTCGAGGCGCTGTCGCTGTACTACGACACCGACGAA TCGAAGGAGGGCACGCGTGCTTTCCGCGAAAGGCGCAAGCCCGATTTCCGGCGTGGAAAGGCTGGCCATGATCCGCAACC CTGA
Upstream 100 bases:
>100_bases ACGTGGTGATCGTGACGCCGCCGCTCGTCATCTCGCGCACGGAGCTGGACGAGGGACTGGATGCGCTCGACGCGGCGCTG ACGGTGCTGGAGGCCGCGCG
Downstream 100 bases:
>100_bases TCTGTCGCCCTGCCTGCTTGGGGCGATCCGGCAGGGCGACATCGTGCGACTCACGATTCGGACGGAGCACTTCGATGAGC ACCACTGACATACTTTGGCA
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNYEDILYREAGGVATITINRPSVYNAFRARTVDELLHAFQQAGWNREIGVIVLTGAGEKAFCTGGDQTSHGDGGYGGRG AIGLPVDELQSLIRDVPKPVIARVNGYAIGGGNVLVTVCDLAIASEAAQLGQVGPRVGSVDPGFGTALLARVLGEKRARE VWFLCRRYTAREALAMGWLNAVVPADQLDGEVARWCDEILALSPTALAIAKRSFNADSENIRAIGALGFEALSLYYDTDE SKEGTRAFRERRKPDFRRGKAGHDPQP
Sequences:
>Translated_267_residues MNYEDILYREAGGVATITINRPSVYNAFRARTVDELLHAFQQAGWNREIGVIVLTGAGEKAFCTGGDQTSHGDGGYGGRG AIGLPVDELQSLIRDVPKPVIARVNGYAIGGGNVLVTVCDLAIASEAAQLGQVGPRVGSVDPGFGTALLARVLGEKRARE VWFLCRRYTAREALAMGWLNAVVPADQLDGEVARWCDEILALSPTALAIAKRSFNADSENIRAIGALGFEALSLYYDTDE SKEGTRAFRERRKPDFRRGKAGHDPQP >Mature_267_residues MNYEDILYREAGGVATITINRPSVYNAFRARTVDELLHAFQQAGWNREIGVIVLTGAGEKAFCTGGDQTSHGDGGYGGRG AIGLPVDELQSLIRDVPKPVIARVNGYAIGGGNVLVTVCDLAIASEAAQLGQVGPRVGSVDPGFGTALLARVLGEKRARE VWFLCRRYTAREALAMGWLNAVVPADQLDGEVARWCDEILALSPTALAIAKRSFNADSENIRAIGALGFEALSLYYDTDE SKEGTRAFRERRKPDFRRGKAGHDPQP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=261, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI31542718, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI45643119, Length=257, Percent_Identity=27.2373540856031, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI260275230, Length=257, Percent_Identity=27.2373540856031, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI260274832, Length=257, Percent_Identity=27.2373540856031, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4502327, Length=262, Percent_Identity=27.4809160305344, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI25453481, Length=214, Percent_Identity=26.6355140186916, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI51538573, Length=214, Percent_Identity=26.6355140186916, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4757966, Length=214, Percent_Identity=26.6355140186916, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI51538581, Length=214, Percent_Identity=26.6355140186916, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4757968, Length=216, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI49355787, Length=216, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI68989263, Length=191, Percent_Identity=30.8900523560209, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=50.5747126436782, Blast_Score=258, Evalue=2e-70, Organism=Escherichia coli, GI87082183, Length=264, Percent_Identity=28.7878787878788, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787659, Length=252, Percent_Identity=29.3650793650794, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=28.7878787878788, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17554946, Length=249, Percent_Identity=34.9397590361446, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=33.2, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17549921, Length=214, Percent_Identity=28.0373831775701, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17540714, Length=212, Percent_Identity=26.8867924528302, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17535521, Length=248, Percent_Identity=21.7741935483871, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560910, Length=248, Percent_Identity=27.8225806451613, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=35.3846153846154, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=35.3846153846154, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24653139, Length=259, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI19922422, Length=255, Percent_Identity=25.0980392156863, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI21357171, Length=183, Percent_Identity=30.6010928961749, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24654903, Length=192, Percent_Identity=24.4791666666667, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 28778; Mature: 28778
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYEDILYREAGGVATITINRPSVYNAFRARTVDELLHAFQQAGWNREIGVIVLTGAGEK CCHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE AFCTGGDQTSHGDGGYGGRGAIGLPVDELQSLIRDVPKPVIARVNGYAIGGGNVLVTVCD EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCEEECCCCEEEHHHH LAIASEAAQLGQVGPRVGSVDPGFGTALLARVLGEKRAREVWFLCRRYTAREALAMGWLN HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVPADQLDGEVARWCDEILALSPTALAIAKRSFNADSENIRAIGALGFEALSLYYDTDE HHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCC SKEGTRAFRERRKPDFRRGKAGHDPQP CCHHHHHHHHHCCCCHHCCCCCCCCCC >Mature Secondary Structure MNYEDILYREAGGVATITINRPSVYNAFRARTVDELLHAFQQAGWNREIGVIVLTGAGEK CCHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE AFCTGGDQTSHGDGGYGGRGAIGLPVDELQSLIRDVPKPVIARVNGYAIGGGNVLVTVCD EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCEEECCCCEEEHHHH LAIASEAAQLGQVGPRVGSVDPGFGTALLARVLGEKRAREVWFLCRRYTAREALAMGWLN HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVPADQLDGEVARWCDEILALSPTALAIAKRSFNADSENIRAIGALGFEALSLYYDTDE HHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCC SKEGTRAFRERRKPDFRRGKAGHDPQP CCHHHHHHHHHCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]