| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022962
Identifier: 107022962
GI number: 107022962
Start: 1552877
End: 1554958
Strand: Reverse
Name: 107022962
Synonym: Bcen_1410
Alternate gene names: NA
Gene position: 1554958-1552877 (Counterclockwise)
Preceding gene: 107022963
Following gene: 107022961
Centisome position: 47.2
GC content: 59.08
Gene sequence:
>2082_bases ATGTCCGATACCAATACTCAAAACAAATCGAAGGCGCCGATCGATGTCGACAAGCGTCAGGCGGTCGCCAGTGCGCAGTG GTTTCTGGAAAAGCAGGCGGACTACTACGCGCCGCCTTATGAAAAGAACAATATCGACGTATTCATTTGCGGAGAGGACG CGTTTACGCAGATTGCGGCCGACTTGAAGGCGGCCAAGCATAGTGTCGAAATCATTTGCTGGGGCTTTGACCCCGGGATG GAACTGATCCGCAAGGGCACGGTCTGGCCGCGAGGAGATACCTGGGGCGGGCTGCTGCGCGATGTCGCGGCCGGGAAATT CAATAACGGCAAGCCGGTGCAGGTTCGCTTGCTCTCGTGGTATGGCGTGATCGGAAGTACCCTGTCGAACAACATGCCGG GCTACAGCGGCGGCCGCCTTACGTACGAGCAGAAGATGGCCAGGGAGGTCGGCAAGGCGGGCGGCATCTATGTGCAGTTG GGCAATGCGCCGCAGCCGCTGACCCCACAGGACCGGCGCGAGGACTTCAATGCGCGATGGTACGACGACGCGTTTGCCGG CCGCCTGCCCAACCTGTCTCTTCGTACGCGGGACGGCAGCAGCAAGGACGTTCACGAAAGCCTGGCGCACGAGCCGGGCA AGCGCGACAACCTGGAAGATTTCGGCCTGGAGAAATTGGCCACCGACCATCAGAAGACTATCCTGATCGACTACGACCAC GAGGGCGGTACACAGGCGGTCGGCTACGTGATGGGGCTGAACAGCGTGACGGACTATTGGGATACGCAGCAGCATCTCTT CAATGATCCGCGTCGTGGTGAAGGATGGGAGGGTGCCAACGACTCGCAACCGGGGTTGAAGCCTTATCAGGACTACGCGA GTCGGATTCGGGGCGAAGCACTCGTGGCGGTAAGCAAAAACTTTACCGATGCGTGGAACCGGGCCAAGGGTCAGGGGGCG AACCTGTCGCGAACACACGATTTCAAGAAGGTGCCTCCGGGTTTGACGAAAAATATCGGCACGCCGTGCCAGCGTGCGCA AATCGCTCGTACGCAGCCCGAAGAAAAGGACAAATCCATCAAGGCCTTGTATATCCAGGCGACGTCGTTTGCGCGCAACT ATATCTACATCGAGAACCAGTATTTCCAATATACCGAGTGGCCGACGAAGCTGAAGGAATTGCGAACCGAGTTTCTGTCG TGCAGCCAGGCAGCGGGAAGGAGTCCTGCCGACGTACCGAATTTGCACGTGATGGCCGTTATCCCCACGCCCGAGCGGCC ACAGATGGTGCCGCGCACGCACGATACCGTTAAGGTTCTGGGCTATGGCACCTCGATGCCCAATCAGGACAAGGCGGTCG AAGACGAACTCGCGCGCAATCGCCAGCAACAGGCGACCTGGGACGCCTACGTCAAGCGGCAGAAAGCGAGCGGCGCAAGG ATCGACCCCGACTACTATCCTGCTCCGCTGTCGCCTGCGGCGCAAAGCGCCAAGGACCTTGGTGACAAGGCGTCGCTCAC GAAATCGCTCGATCAGATGGGCATCCGTGCGCTGGTCGGCAGCCTGTGGTCCTTTGACTACAATTGGCGCAGCTCCAAGC TGAATACCGAGACGGAGAAGAAACAGGCCCGCTGGGATGACTACGTAAAAAAGCAGCAAGCCAAAGGCGAACTGCCCGAC CCGGACTTGGCGCCGATGCTGCCGTTGCCGGCGCAATCGTTCGCGGCCCGGTACAGGGAAATCTACATCCACAGTAAATT GCTGATGATCGACGACAGTTTCTTCACGTTGGGCAGTGCCAATCTGAACTTGCGGAGCATGGCAGTGGATGCCGAGATCA ACGTGGGAACCGACGACCGCGCGAAAAGCGAAGATCTGCGCAAACGGGTGTGGAAGCTTCACACAGGAAATGCAGCGGAT TGCAACCCGTCTTCGCTGACTCCGCTGGCCATGTCGAAGGCGTTCCGCAACTGGGTGCAATTGCTGCGGGCCAACGAGCT TGCCCGAAAGAAGGGGGACGCGCCAACCGGCTTCCTGCATCCGTTCCACGATGACCGTGTGACAGGTATTCGCTTATCCT GA
Upstream 100 bases:
>100_bases CCGCGCAGGGATGGCGGGCAGTCGACGGCGATCCGGAATCGCGCCAGCGCCACGCACAGGGCTGACCGGCGATTCGCTAC AGTTTTCGACGAGAAACGTG
Downstream 100 bases:
>100_bases GTAGGCTCCCTAAATCGTGCTAAATCAATTGCGTTCGACCCTCGCCAACCGTATCGGCTTCGCCCGGTTAGTTTCTGCTT TCCTGTTCCTTGCATGTGCC
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: Phospholipase Protein; Phospholipase; Phospholipase D Family Protein; Phospholipase D Protein
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MSDTNTQNKSKAPIDVDKRQAVASAQWFLEKQADYYAPPYEKNNIDVFICGEDAFTQIAADLKAAKHSVEIICWGFDPGM ELIRKGTVWPRGDTWGGLLRDVAAGKFNNGKPVQVRLLSWYGVIGSTLSNNMPGYSGGRLTYEQKMAREVGKAGGIYVQL GNAPQPLTPQDRREDFNARWYDDAFAGRLPNLSLRTRDGSSKDVHESLAHEPGKRDNLEDFGLEKLATDHQKTILIDYDH EGGTQAVGYVMGLNSVTDYWDTQQHLFNDPRRGEGWEGANDSQPGLKPYQDYASRIRGEALVAVSKNFTDAWNRAKGQGA NLSRTHDFKKVPPGLTKNIGTPCQRAQIARTQPEEKDKSIKALYIQATSFARNYIYIENQYFQYTEWPTKLKELRTEFLS CSQAAGRSPADVPNLHVMAVIPTPERPQMVPRTHDTVKVLGYGTSMPNQDKAVEDELARNRQQQATWDAYVKRQKASGAR IDPDYYPAPLSPAAQSAKDLGDKASLTKSLDQMGIRALVGSLWSFDYNWRSSKLNTETEKKQARWDDYVKKQQAKGELPD PDLAPMLPLPAQSFAARYREIYIHSKLLMIDDSFFTLGSANLNLRSMAVDAEINVGTDDRAKSEDLRKRVWKLHTGNAAD CNPSSLTPLAMSKAFRNWVQLLRANELARKKGDAPTGFLHPFHDDRVTGIRLS
Sequences:
>Translated_693_residues MSDTNTQNKSKAPIDVDKRQAVASAQWFLEKQADYYAPPYEKNNIDVFICGEDAFTQIAADLKAAKHSVEIICWGFDPGM ELIRKGTVWPRGDTWGGLLRDVAAGKFNNGKPVQVRLLSWYGVIGSTLSNNMPGYSGGRLTYEQKMAREVGKAGGIYVQL GNAPQPLTPQDRREDFNARWYDDAFAGRLPNLSLRTRDGSSKDVHESLAHEPGKRDNLEDFGLEKLATDHQKTILIDYDH EGGTQAVGYVMGLNSVTDYWDTQQHLFNDPRRGEGWEGANDSQPGLKPYQDYASRIRGEALVAVSKNFTDAWNRAKGQGA NLSRTHDFKKVPPGLTKNIGTPCQRAQIARTQPEEKDKSIKALYIQATSFARNYIYIENQYFQYTEWPTKLKELRTEFLS CSQAAGRSPADVPNLHVMAVIPTPERPQMVPRTHDTVKVLGYGTSMPNQDKAVEDELARNRQQQATWDAYVKRQKASGAR IDPDYYPAPLSPAAQSAKDLGDKASLTKSLDQMGIRALVGSLWSFDYNWRSSKLNTETEKKQARWDDYVKKQQAKGELPD PDLAPMLPLPAQSFAARYREIYIHSKLLMIDDSFFTLGSANLNLRSMAVDAEINVGTDDRAKSEDLRKRVWKLHTGNAAD CNPSSLTPLAMSKAFRNWVQLLRANELARKKGDAPTGFLHPFHDDRVTGIRLS >Mature_692_residues SDTNTQNKSKAPIDVDKRQAVASAQWFLEKQADYYAPPYEKNNIDVFICGEDAFTQIAADLKAAKHSVEIICWGFDPGME LIRKGTVWPRGDTWGGLLRDVAAGKFNNGKPVQVRLLSWYGVIGSTLSNNMPGYSGGRLTYEQKMAREVGKAGGIYVQLG NAPQPLTPQDRREDFNARWYDDAFAGRLPNLSLRTRDGSSKDVHESLAHEPGKRDNLEDFGLEKLATDHQKTILIDYDHE GGTQAVGYVMGLNSVTDYWDTQQHLFNDPRRGEGWEGANDSQPGLKPYQDYASRIRGEALVAVSKNFTDAWNRAKGQGAN LSRTHDFKKVPPGLTKNIGTPCQRAQIARTQPEEKDKSIKALYIQATSFARNYIYIENQYFQYTEWPTKLKELRTEFLSC SQAAGRSPADVPNLHVMAVIPTPERPQMVPRTHDTVKVLGYGTSMPNQDKAVEDELARNRQQQATWDAYVKRQKASGARI DPDYYPAPLSPAAQSAKDLGDKASLTKSLDQMGIRALVGSLWSFDYNWRSSKLNTETEKKQARWDDYVKKQQAKGELPDP DLAPMLPLPAQSFAARYREIYIHSKLLMIDDSFFTLGSANLNLRSMAVDAEINVGTDDRAKSEDLRKRVWKLHTGNAADC NPSSLTPLAMSKAFRNWVQLLRANELARKKGDAPTGFLHPFHDDRVTGIRLS
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77745; Mature: 77614
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTNTQNKSKAPIDVDKRQAVASAQWFLEKQADYYAPPYEKNNIDVFICGEDAFTQIAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHH DLKAAKHSVEIICWGFDPGMELIRKGTVWPRGDTWGGLLRDVAAGKFNNGKPVQVRLLSW HHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEH YGVIGSTLSNNMPGYSGGRLTYEQKMAREVGKAGGIYVQLGNAPQPLTPQDRREDFNARW HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCC YDDAFAGRLPNLSLRTRDGSSKDVHESLAHEPGKRDNLEDFGLEKLATDHQKTILIDYDH CCCHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHCHHHHHCCCCCEEEEEECC EGGTQAVGYVMGLNSVTDYWDTQQHLFNDPRRGEGWEGANDSQPGLKPYQDYASRIRGEA CCCCHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCE LVAVSKNFTDAWNRAKGQGANLSRTHDFKKVPPGLTKNIGTPCQRAQIARTQPEEKDKSI EEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCHHHCCCE KALYIQATSFARNYIYIENQYFQYTEWPTKLKELRTEFLSCSQAAGRSPADVPNLHVMAV EEEEEEEECCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IPTPERPQMVPRTHDTVKVLGYGTSMPNQDKAVEDELARNRQQQATWDAYVKRQKASGAR ECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IDPDYYPAPLSPAAQSAKDLGDKASLTKSLDQMGIRALVGSLWSFDYNWRSSKLNTETEK CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH KQARWDDYVKKQQAKGELPDPDLAPMLPLPAQSFAARYREIYIHSKLLMIDDSFFTLGSA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCEEEECCC NLNLRSMAVDAEINVGTDDRAKSEDLRKRVWKLHTGNAADCNPSSLTPLAMSKAFRNWVQ CCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLRANELARKKGDAPTGFLHPFHDDRVTGIRLS HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure SDTNTQNKSKAPIDVDKRQAVASAQWFLEKQADYYAPPYEKNNIDVFICGEDAFTQIAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHH DLKAAKHSVEIICWGFDPGMELIRKGTVWPRGDTWGGLLRDVAAGKFNNGKPVQVRLLSW HHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEH YGVIGSTLSNNMPGYSGGRLTYEQKMAREVGKAGGIYVQLGNAPQPLTPQDRREDFNARW HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCC YDDAFAGRLPNLSLRTRDGSSKDVHESLAHEPGKRDNLEDFGLEKLATDHQKTILIDYDH CCCHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHCHHHHHCCCCCEEEEEECC EGGTQAVGYVMGLNSVTDYWDTQQHLFNDPRRGEGWEGANDSQPGLKPYQDYASRIRGEA CCCCHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCE LVAVSKNFTDAWNRAKGQGANLSRTHDFKKVPPGLTKNIGTPCQRAQIARTQPEEKDKSI EEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCHHHCCCE KALYIQATSFARNYIYIENQYFQYTEWPTKLKELRTEFLSCSQAAGRSPADVPNLHVMAV EEEEEEEECCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IPTPERPQMVPRTHDTVKVLGYGTSMPNQDKAVEDELARNRQQQATWDAYVKRQKASGAR ECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IDPDYYPAPLSPAAQSAKDLGDKASLTKSLDQMGIRALVGSLWSFDYNWRSSKLNTETEK CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH KQARWDDYVKKQQAKGELPDPDLAPMLPLPAQSFAARYREIYIHSKLLMIDDSFFTLGSA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCEEEECCC NLNLRSMAVDAEINVGTDDRAKSEDLRKRVWKLHTGNAADCNPSSLTPLAMSKAFRNWVQ CCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLRANELARKKGDAPTGFLHPFHDDRVTGIRLS HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA