Click here to switch to the map view.

The map label for this gene is 107022961

Identifier: 107022961

GI number: 107022961

Start: 1551205

End: 1552767

Strand: Reverse

Name: 107022961

Synonym: Bcen_1409

Alternate gene names: NA

Gene position: 1552767-1551205 (Counterclockwise)

Preceding gene: 107022962

Following gene: 107022960

Centisome position: 47.13

GC content: 61.8

Gene sequence:

>1563_bases
ATGAACGATTCTCTTCCTCGCAACATGTCGCTGACCGCCTTCGATCCGCATCGCACAGCATTCGAGTGCAAGCACGAGGT
TGACGCGGTTCCTCCGCTGGATCCGGAGGCCGATCGCTGGAATCAGCAGGCAATGGCGCTGACCAGTTCGCTGTTGTGGC
CGAACCAGCGCGATTACAAGGGGGCTGTCGATTTGTGGACGAAGGCGGCCGAGCGTAAGCACTGGAAAGCCATGCTGAAT
CTGGCGAATGCCTACGCTCAGGGGCAAGGTGTGGAACGTGATTCGGAACATGCCGTTCAGATCACCGAACAGGCGATGAA
ACTGGGTATTCCGGCAGCCTACGATTTGATGGGCACGTACCACATGAACGGGATGGGGGTTAAGCAGGATGCGAGCCGCG
CCTATGCGTTCTGGCAACTGGCCGCCGATATGGGTAGTCCAAGTGCGATGGCGTATCTGGGTGGCAAGATGGATGCGCTC
TATGACGACCCGAAGGCAGGCTTCTGGGGTAACCGAAAGATCGCGCTCAAGATGCTTGAATGTGCGGTCGCGCAGGGCAA
CGGACTTGCTGCATATGAGTTGGGAACGACGATTGTGGGAGATCGAGCCGAGTTGAGCGAGAACAACGAACGCGCACTCA
AGACCCTGCATGCGGGCGTGAAATTCGGCAGCGCCGAGAGCGCGGGGTGGTTGAGTGCGTCGTTTGGCAAGGGGGACGCC
CTGGTCGGCCATGTCAAGGATGAAGCCCGCGCCGAACGCTACAGCGTCCTTGCCGACCGCCTCGAGCGCGACCCCGACCT
GCGTCTGCCGAATCTGGACAAGGTCGTGCCGCTGCCGCCCGCCAAGTTGCCCAAGTGGGACGGCAACAAGGAGACGTTGA
TCGACGCGGCGAAAGCGGTGACGTCCGTGCCGGCGTCGCCGGTCAAACCTGCGGCGCACCCCGTGTCGCTGCGTACGGGG
CGCGCGCACGTGCCCGATGGCTACATGCTGCCGGAGAAGCCGCAGGTTGCCGTTCCTCCGCAGGCGGAAACGACGGCTGC
TCCTGTCGGTGGTTACTGGCTCGCCCAGCTGAAGTATCCGAGCGCCGAACGTCACTTCGCATGGAATGCGGCTCAGGTAC
CGATGCATTACCGGAATGATGAACTGTTCGATCGGAGTCGCCCCGGCCTGATGCCTGAGGACGGTCGCATCTTCTTCCAC
TATGTCGGCGATGCGATTCCGATGCCCGTGCAATCGGCGGAATCGCATCCGCGTGTGACACAGGGCATTGCGCGCGCCGC
CGAATTTCCCGACCCGGCTATCCGGTGTCGCGGCATCCGCGCGTGCCCGGTGACCGGTATTTGGCAGGCTGTGGTGGCGG
ACGATCATCCTCGGGCGACCACGTTCAATCAGTGGTATCGCCAGGCCTACGTGTTGCAGGGTGACGCGTTTCCCGATCCA
CGGGTCATGCATCTGGACGTATCGCCGGCGGACGTGACGTGGACGTGGTGGAACGAAGCTAATCACCTTGGATTTGCGAA
GCTGCCTCAGGTCAGCCTCGGCAACCCTTCCGAGAACGCTTGA

Upstream 100 bases:

>100_bases
CTAAATCGTGCTAAATCAATTGCGTTCGACCCTCGCCAACCGTATCGGCTTCGCCCGGTTAGTTTCTGCTTTCCTGTTCC
TTGCATGTGCCGCCTGCTCA

Downstream 100 bases:

>100_bases
CGGAGCAGAGATGCGCAAATCGACGATTGCCGCGACGGTGTGTGTCGGAGGGATGATCTTGGCTGCCTGGGGGGGGCAGT
TGCAACAATGGGGGCCGTGG

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: Sel1 Domain-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; TPR Repeat Containing SEL1 Subfamily; TPR Repeat-Containing Protein; Sel1-Like Repeat; Sel1-Like Lipoprotein

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MNDSLPRNMSLTAFDPHRTAFECKHEVDAVPPLDPEADRWNQQAMALTSSLLWPNQRDYKGAVDLWTKAAERKHWKAMLN
LANAYAQGQGVERDSEHAVQITEQAMKLGIPAAYDLMGTYHMNGMGVKQDASRAYAFWQLAADMGSPSAMAYLGGKMDAL
YDDPKAGFWGNRKIALKMLECAVAQGNGLAAYELGTTIVGDRAELSENNERALKTLHAGVKFGSAESAGWLSASFGKGDA
LVGHVKDEARAERYSVLADRLERDPDLRLPNLDKVVPLPPAKLPKWDGNKETLIDAAKAVTSVPASPVKPAAHPVSLRTG
RAHVPDGYMLPEKPQVAVPPQAETTAAPVGGYWLAQLKYPSAERHFAWNAAQVPMHYRNDELFDRSRPGLMPEDGRIFFH
YVGDAIPMPVQSAESHPRVTQGIARAAEFPDPAIRCRGIRACPVTGIWQAVVADDHPRATTFNQWYRQAYVLQGDAFPDP
RVMHLDVSPADVTWTWWNEANHLGFAKLPQVSLGNPSENA

Sequences:

>Translated_520_residues
MNDSLPRNMSLTAFDPHRTAFECKHEVDAVPPLDPEADRWNQQAMALTSSLLWPNQRDYKGAVDLWTKAAERKHWKAMLN
LANAYAQGQGVERDSEHAVQITEQAMKLGIPAAYDLMGTYHMNGMGVKQDASRAYAFWQLAADMGSPSAMAYLGGKMDAL
YDDPKAGFWGNRKIALKMLECAVAQGNGLAAYELGTTIVGDRAELSENNERALKTLHAGVKFGSAESAGWLSASFGKGDA
LVGHVKDEARAERYSVLADRLERDPDLRLPNLDKVVPLPPAKLPKWDGNKETLIDAAKAVTSVPASPVKPAAHPVSLRTG
RAHVPDGYMLPEKPQVAVPPQAETTAAPVGGYWLAQLKYPSAERHFAWNAAQVPMHYRNDELFDRSRPGLMPEDGRIFFH
YVGDAIPMPVQSAESHPRVTQGIARAAEFPDPAIRCRGIRACPVTGIWQAVVADDHPRATTFNQWYRQAYVLQGDAFPDP
RVMHLDVSPADVTWTWWNEANHLGFAKLPQVSLGNPSENA
>Mature_520_residues
MNDSLPRNMSLTAFDPHRTAFECKHEVDAVPPLDPEADRWNQQAMALTSSLLWPNQRDYKGAVDLWTKAAERKHWKAMLN
LANAYAQGQGVERDSEHAVQITEQAMKLGIPAAYDLMGTYHMNGMGVKQDASRAYAFWQLAADMGSPSAMAYLGGKMDAL
YDDPKAGFWGNRKIALKMLECAVAQGNGLAAYELGTTIVGDRAELSENNERALKTLHAGVKFGSAESAGWLSASFGKGDA
LVGHVKDEARAERYSVLADRLERDPDLRLPNLDKVVPLPPAKLPKWDGNKETLIDAAKAVTSVPASPVKPAAHPVSLRTG
RAHVPDGYMLPEKPQVAVPPQAETTAAPVGGYWLAQLKYPSAERHFAWNAAQVPMHYRNDELFDRSRPGLMPEDGRIFFH
YVGDAIPMPVQSAESHPRVTQGIARAAEFPDPAIRCRGIRACPVTGIWQAVVADDHPRATTFNQWYRQAYVLQGDAFPDP
RVMHLDVSPADVTWTWWNEANHLGFAKLPQVSLGNPSENA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57215; Mature: 57215

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSLPRNMSLTAFDPHRTAFECKHEVDAVPPLDPEADRWNQQAMALTSSLLWPNQRDYK
CCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GAVDLWTKAAERKHWKAMLNLANAYAQGQGVERDSEHAVQITEQAMKLGIPAAYDLMGTY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEE
HMNGMGVKQDASRAYAFWQLAADMGSPSAMAYLGGKMDALYDDPKAGFWGNRKIALKMLE
ECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHCCCCHHHCCCCCCCCCCCHHHHHHHHH
CAVAQGNGLAAYELGTTIVGDRAELSENNERALKTLHAGVKFGSAESAGWLSASFGKGDA
HHHHCCCCEEEEECCCEEECCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCE
LVGHVKDEARAERYSVLADRLERDPDLRLPNLDKVVPLPPAKLPKWDGNKETLIDAAKAV
EEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TSVPASPVKPAAHPVSLRTGRAHVPDGYMLPEKPQVAVPPQAETTAAPVGGYWLAQLKYP
HHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECC
SAERHFAWNAAQVPMHYRNDELFDRSRPGLMPEDGRIFFHYVGDAIPMPVQSAESHPRVT
CCCCCEECCHHCCCEECCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHH
QGIARAAEFPDPAIRCRGIRACPVTGIWQAVVADDHPRATTFNQWYRQAYVLQGDAFPDP
HHHHHHHCCCCHHHHCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCCCCCC
RVMHLDVSPADVTWTWWNEANHLGFAKLPQVSLGNPSENA
EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDSLPRNMSLTAFDPHRTAFECKHEVDAVPPLDPEADRWNQQAMALTSSLLWPNQRDYK
CCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GAVDLWTKAAERKHWKAMLNLANAYAQGQGVERDSEHAVQITEQAMKLGIPAAYDLMGTY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEE
HMNGMGVKQDASRAYAFWQLAADMGSPSAMAYLGGKMDALYDDPKAGFWGNRKIALKMLE
ECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHCCCCHHHCCCCCCCCCCCHHHHHHHHH
CAVAQGNGLAAYELGTTIVGDRAELSENNERALKTLHAGVKFGSAESAGWLSASFGKGDA
HHHHCCCCEEEEECCCEEECCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCE
LVGHVKDEARAERYSVLADRLERDPDLRLPNLDKVVPLPPAKLPKWDGNKETLIDAAKAV
EEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TSVPASPVKPAAHPVSLRTGRAHVPDGYMLPEKPQVAVPPQAETTAAPVGGYWLAQLKYP
HHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECC
SAERHFAWNAAQVPMHYRNDELFDRSRPGLMPEDGRIFFHYVGDAIPMPVQSAESHPRVT
CCCCCEECCHHCCCEECCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHH
QGIARAAEFPDPAIRCRGIRACPVTGIWQAVVADDHPRATTFNQWYRQAYVLQGDAFPDP
HHHHHHHCCCCHHHHCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCCCCCC
RVMHLDVSPADVTWTWWNEANHLGFAKLPQVSLGNPSENA
EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA