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The map label for this gene is yjgH [H]

Identifier: 107022854

GI number: 107022854

Start: 1432991

End: 1433389

Strand: Reverse

Name: yjgH [H]

Synonym: Bcen_1302

Alternate gene names: 107022854

Gene position: 1433389-1432991 (Counterclockwise)

Preceding gene: 107022855

Following gene: 107022853

Centisome position: 43.51

GC content: 64.66

Gene sequence:

>399_bases
ATGAGCAAACGCGAAGCGATCATCCCGGCCGGCATGGAAGCCGTGTACGAAAAAATCGGCTATGCACCGGCGATCAAGGT
CGGCGATACCGTTTACGTGTCCGGCCAGATCGGCCGCGACGCGGCGATGCAACTGGTCGAGGGCCGCGAAGCCCAGATCG
TGCAGGCGTTCGAGAACCTGAAGCGCGTGCTGGATGCCGGCGGCGCATCGCTCGACGACGTGGTCGACCTCACCACGTTC
CATACCGACATGCGTGACCTGCCGCTGTTCATGCAGGTGCGCGACCGCTATTTCCATGCGCATCCGCTGCCGGCGTGGAC
GGCCGTCGGTGCGCACATGCTCGGCGGCTCGCCCGGCTATATCGTCGAGATCAAGGCGATGGCGGTGCTGCGCGACTAG

Upstream 100 bases:

>100_bases
ATACGGGTTGAAGGGCGTTGACGGTGCACGCGCCGCAGCCGCGTGCACGACGACCCTCACATAACCGGCCGGCGCGGCAA
GCGCGGCCACGGAGACATTC

Downstream 100 bases:

>100_bases
TCAATGCGGTGCCCGCGGTTTTGGCGCGTGTATCGGCTTTCCCTGTACGCGAATCAATCAAGAGAGAACGGAGGGGTGGA
ATGGCGTCGATGCTCAACGG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKREAIIPAGMEAVYEKIGYAPAIKVGDTVYVSGQIGRDAAMQLVEGREAQIVQAFENLKRVLDAGGASLDDVVDLTTF
HTDMRDLPLFMQVRDRYFHAHPLPAWTAVGAHMLGGSPGYIVEIKAMAVLRD

Sequences:

>Translated_132_residues
MSKREAIIPAGMEAVYEKIGYAPAIKVGDTVYVSGQIGRDAAMQLVEGREAQIVQAFENLKRVLDAGGASLDDVVDLTTF
HTDMRDLPLFMQVRDRYFHAHPLPAWTAVGAHMLGGSPGYIVEIKAMAVLRD
>Mature_131_residues
SKREAIIPAGMEAVYEKIGYAPAIKVGDTVYVSGQIGRDAAMQLVEGREAQIVQAFENLKRVLDAGGASLDDVVDLTTFH
TDMRDLPLFMQVRDRYFHAHPLPAWTAVGAHMLGGSPGYIVEIKAMAVLRD

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=129, Percent_Identity=38.7596899224806, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14431; Mature: 14300

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKREAIIPAGMEAVYEKIGYAPAIKVGDTVYVSGQIGRDAAMQLVEGREAQIVQAFENL
CCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH
KRVLDAGGASLDDVVDLTTFHTDMRDLPLFMQVRDRYFHAHPLPAWTAVGAHMLGGSPGY
HHHHHCCCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
IVEIKAMAVLRD
EEEEEEEEEECC
>Mature Secondary Structure 
SKREAIIPAGMEAVYEKIGYAPAIKVGDTVYVSGQIGRDAAMQLVEGREAQIVQAFENL
CCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH
KRVLDAGGASLDDVVDLTTFHTDMRDLPLFMQVRDRYFHAHPLPAWTAVGAHMLGGSPGY
HHHHHCCCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
IVEIKAMAVLRD
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]