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The map label for this gene is ssuC [C]

Identifier: 107022795

GI number: 107022795

Start: 1369853

End: 1370740

Strand: Reverse

Name: ssuC [C]

Synonym: Bcen_1242

Alternate gene names: 107022795

Gene position: 1370740-1369853 (Counterclockwise)

Preceding gene: 107022796

Following gene: 107022794

Centisome position: 41.61

GC content: 69.59

Gene sequence:

>888_bases
ATGAGTACGATCGATCCGGCCGTGCCGCCGCTGCCGCCCGTGCGCGCCGAATACACGCGCACGCTCGACACGCTGCCCGA
CGCCGAGCGTGCGGCGCCCGCGCCGCTGCTGCGCCGCATCGCCGGCGCCGCCTGGTTTCGCCGCAGCGTCATCGCGCTCG
TGCTGATCGCCGCATGGGAAATCGTCGCGCGCATCGTCGCGAACGATCTGCTCGTCCCGACCTTCGGCGCGACGCTGGCC
GCGTTCGTGCAGGGCGTCGAGTCGGGCGAACTGCTGGTCAAGACCGGCATCTCGATGTCGGTGCTGCTGCGCGGCTATGC
GCTGGGCGTGCTGCTGGCGTTCGCGCTGACGTCGCTGGCGGTATCCACGCGCATCGGCCGCGACCTGCTGACGATGCTCA
CGTCGATGTTCAATCCGCTGCCGTCGATCGCATTGCTGCCGATCGCGCTGTTGTGGTTCGGGCTCGGCACCGGCAGCCTG
CTGTTCGTGCTCGTGCATGCGGTGCTGTGGCCGCTCGCGCTCAGCATCTATACCGGCTTCGTCGGCGTGCCCGCCACGCT
GAAAATGGCCGGGCGCAACTACGGGCTCACGGGCCTGCGCCAGATCGCGCTGATCCTCGTGCCGGCCGCGCTGCCGTCGA
TCCTGTCGGGCCTGCGCGTGGGCTGGGCCTTCGCGTGGCGCACGCTGATCGCGGCCGAGCTCGTGTTCGGCGCGAGCGCG
GGGCAGGGCGGCCTCGGCTGGTACATCTTCCAGAACCGCAACGAGCTGTATACCGACCGCGTGTTCGCGGGCCTCGCGGC
GGTCATCGTGATCGGGCTGCTGGTCGAGAATCTGGTGTTCGATACGCTCGAACGCGCGACCGTGCGTCGCTGGGGCATTC
AGCACTGA

Upstream 100 bases:

>100_bases
CCGGCGACTTCCGCGACAACGTCGCGCGAATCCACCACCTGCTGTTCGACACCGACGCACCGCATGCACCGCACGCAGCG
ACGACGGAGGACGCCGCATC

Downstream 100 bases:

>100_bases
CGGGGCGGTCCGCGATCAATCCCGGCGCTTGTATAACGTAAGCTGAAATCGGTTTTTCACGCGCGGCGGGGGCGTCCTTA
TACTCGGCGGATGCGTGTAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSTIDPAVPPLPPVRAEYTRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGATLA
AFVQGVESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTGSL
LFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA
GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRRWGIQH

Sequences:

>Translated_295_residues
MSTIDPAVPPLPPVRAEYTRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGATLA
AFVQGVESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTGSL
LFVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA
GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRRWGIQH
>Mature_294_residues
STIDPAVPPLPPVRAEYTRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWEIVARIVANDLLVPTFGATLAA
FVQGVESGELLVKTGISMSVLLRGYALGVLLAFALTSLAVSTRIGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTGSLL
FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASAG
QGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRRWGIQH

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=236, Percent_Identity=27.9661016949153, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786564, Length=136, Percent_Identity=33.0882352941176, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31622; Mature: 31491

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIDPAVPPLPPVRAEYTRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWE
CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVARIVANDLLVPTFGATLAAFVQGVESGELLVKTGISMSVLLRGYALGVLLAFALTSLA
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VSTRIGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTGSLLFVLVHAVLWPLALSIYTGF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VGVPATLKMAGRNYGLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRRWGIQH
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STIDPAVPPLPPVRAEYTRTLDTLPDAERAAPAPLLRRIAGAAWFRRSVIALVLIAAWE
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVARIVANDLLVPTFGATLAAFVQGVESGELLVKTGISMSVLLRGYALGVLLAFALTSLA
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VSTRIGRDLLTMLTSMFNPLPSIALLPIALLWFGLGTGSLLFVLVHAVLWPLALSIYTGF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VGVPATLKMAGRNYGLTGLRQIALILVPAALPSILSGLRVGWAFAWRTLIAAELVFGASA
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQGGLGWYIFQNRNELYTDRVFAGLAAVIVIGLLVENLVFDTLERATVRRWGIQH
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]