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The map label for this gene is soxC [H]

Identifier: 107022794

GI number: 107022794

Start: 1368477

End: 1369694

Strand: Reverse

Name: soxC [H]

Synonym: Bcen_1241

Alternate gene names: 107022794

Gene position: 1369694-1368477 (Counterclockwise)

Preceding gene: 107022795

Following gene: 107022789

Centisome position: 41.57

GC content: 70.69

Gene sequence:

>1218_bases
ATGACTGCCCGTGATGCCGTCGATCCGCGCGACGCATTGCGCGACGCGCTTGCCGCGCTGCCCGACCTCGCGACTTTGAT
CGGCGAGGATGCCGCACCACGCGAGGCGCGTCGCGAACTGCCGTTCGAAGGCTTCGCGCTCTTCCGGCGCTCGGCGCTGG
GCGCGCTGCGGATTCCGGCCGAGCGCGGCGGCCTCGGCGGCACGCTGGTCGACCTGTTCGACACGATCGCGACGCTGGCG
GCCGCCGATTCGAATCTCGCGCACGCGCTGCGCATCCACTACGACCAGACCGAGACGCTGCGGCTGTCGCCGCGCACCGC
GTTCAACGACGTGCAGCTCGAGCGCGTGCTCGCCGGCGCGATCTTCGGCGGCGCGTCGACCGAGCGCGGCACGTCGCGCC
CGGGCGAGAACACGACCGTGCTGCGCCGCGACGGCGACCACTACCGCGTGACGGGCCGCAAATACTATTCGACGGGCACC
GCGTTCGCCGATTTCGCGCGCATCAACGTGGAGAACGAGCAGGGCGACACGCTCGCCGTGATCATTCCGGTGGCGCGCGA
TGGCCTGCAGGTGCTCGACGACTGGGACGGCATGGGCCAGCGCATGACCGCGAGCGGCAGCCTGTTGCTGAACGACGTGC
AGGTGTTCGCGGACGAAGTGGTCCCGCGCGACGGGGCGACGCTCGTCGGCCGTCATTGCGGTGCGCTGCGGCAGCTTCAT
CTCGTCGCGACGGGCGCCGGCATCGTGCGCAACGTGGTGGCCGATGCGCGCCGCTACGTGCTCGCGCACGGCCGTCCCGC
GCTGCACAGCCCGGCGCCGACCGCACGCGACGATCATTTCGTCCAGCAGATCGTCGGCGAGCTGTCCGCGCACAGCCATG
CGATCGACGCGCTCGTGCGAGAAAACGCGCGCGCGCTCGACCGCTCCGCCGACGCGATCGAAGCGGGCGCCGCCGATGCG
GATGCGCTCGTACTCGACAGCGCGCTCGCGACCGCGCGCACGCAACTGATCGTCAGCAAGCTCGCGCTGCATGCGGCCGA
GCGGCTGTTCGAAGTGGGCGGCGCGTCGGCGACGGCGCGCGAGCACAACTTCGATCGCCACTGGCGCAACCTGCGCACGA
TCTTCAGCCACAACCCGTTGCTGCACAAGGCGCGCGTGGTCGGCGATTACGTGCTGAACGGCGTGACCACGCACCTCACC
GAAGGGCGCGTGTTCTGA

Upstream 100 bases:

>100_bases
ACGCGCGGCGGGGGCGTCCTTATACTCGGCGGATGCGTGTAACGGACGCCGTGTCGCGCGTTGCTTCGCCCCCCGATCTC
CCCCAACAAGGACCTGCCGA

Downstream 100 bases:

>100_bases
CGACGGCCGCCAGCGGCGGCGGCTACGCCGTCGTGCCGGGTTTCAGCGCCGACCTTAACGCCGCAGGCCGGCTTTGCGCA
GCAGCGGCAGCACGCGCTCG

Product: Acyl-CoA dehydrogenase, type 2-like

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTARDAVDPRDALRDALAALPDLATLIGEDAAPREARRELPFEGFALFRRSALGALRIPAERGGLGGTLVDLFDTIATLA
AADSNLAHALRIHYDQTETLRLSPRTAFNDVQLERVLAGAIFGGASTERGTSRPGENTTVLRRDGDHYRVTGRKYYSTGT
AFADFARINVENEQGDTLAVIIPVARDGLQVLDDWDGMGQRMTASGSLLLNDVQVFADEVVPRDGATLVGRHCGALRQLH
LVATGAGIVRNVVADARRYVLAHGRPALHSPAPTARDDHFVQQIVGELSAHSHAIDALVRENARALDRSADAIEAGAADA
DALVLDSALATARTQLIVSKLALHAAERLFEVGGASATAREHNFDRHWRNLRTIFSHNPLLHKARVVGDYVLNGVTTHLT
EGRVF

Sequences:

>Translated_405_residues
MTARDAVDPRDALRDALAALPDLATLIGEDAAPREARRELPFEGFALFRRSALGALRIPAERGGLGGTLVDLFDTIATLA
AADSNLAHALRIHYDQTETLRLSPRTAFNDVQLERVLAGAIFGGASTERGTSRPGENTTVLRRDGDHYRVTGRKYYSTGT
AFADFARINVENEQGDTLAVIIPVARDGLQVLDDWDGMGQRMTASGSLLLNDVQVFADEVVPRDGATLVGRHCGALRQLH
LVATGAGIVRNVVADARRYVLAHGRPALHSPAPTARDDHFVQQIVGELSAHSHAIDALVRENARALDRSADAIEAGAADA
DALVLDSALATARTQLIVSKLALHAAERLFEVGGASATAREHNFDRHWRNLRTIFSHNPLLHKARVVGDYVLNGVTTHLT
EGRVF
>Mature_404_residues
TARDAVDPRDALRDALAALPDLATLIGEDAAPREARRELPFEGFALFRRSALGALRIPAERGGLGGTLVDLFDTIATLAA
ADSNLAHALRIHYDQTETLRLSPRTAFNDVQLERVLAGAIFGGASTERGTSRPGENTTVLRRDGDHYRVTGRKYYSTGTA
FADFARINVENEQGDTLAVIIPVARDGLQVLDDWDGMGQRMTASGSLLLNDVQVFADEVVPRDGATLVGRHCGALRQLHL
VATGAGIVRNVVADARRYVLAHGRPALHSPAPTARDDHFVQQIVGELSAHSHAIDALVRENARALDRSADAIEAGAADAD
ALVLDSALATARTQLIVSKLALHAAERLFEVGGASATAREHNFDRHWRNLRTIFSHNPLLHKARVVGDYVLNGVTTHLTE
GRVF

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43690; Mature: 43558

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARDAVDPRDALRDALAALPDLATLIGEDAAPREARRELPFEGFALFRRSALGALRIPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCEEECCH
ERGGLGGTLVDLFDTIATLAAADSNLAHALRIHYDQTETLRLSPRTAFNDVQLERVLAGA
HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHH
IFGGASTERGTSRPGENTTVLRRDGDHYRVTGRKYYSTGTAFADFARINVENEQGDTLAV
HHCCCCCCCCCCCCCCCCEEEEECCCEEEEECCEEECCCCHHHHHHEEEECCCCCCEEEE
IIPVARDGLQVLDDWDGMGQRMTASGSLLLNDVQVFADEVVPRDGATLVGRHCGALRQLH
EEECCCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LVATGAGIVRNVVADARRYVLAHGRPALHSPAPTARDDHFVQQIVGELSAHSHAIDALVR
HHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ENARALDRSADAIEAGAADADALVLDSALATARTQLIVSKLALHAAERLFEVGGASATAR
HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EHNFDRHWRNLRTIFSHNPLLHKARVVGDYVLNGVTTHLTEGRVF
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCCCCCCC
>Mature Secondary Structure 
TARDAVDPRDALRDALAALPDLATLIGEDAAPREARRELPFEGFALFRRSALGALRIPA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCEEECCH
ERGGLGGTLVDLFDTIATLAAADSNLAHALRIHYDQTETLRLSPRTAFNDVQLERVLAGA
HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHH
IFGGASTERGTSRPGENTTVLRRDGDHYRVTGRKYYSTGTAFADFARINVENEQGDTLAV
HHCCCCCCCCCCCCCCCCEEEEECCCEEEEECCEEECCCCHHHHHHEEEECCCCCCEEEE
IIPVARDGLQVLDDWDGMGQRMTASGSLLLNDVQVFADEVVPRDGATLVGRHCGALRQLH
EEECCCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LVATGAGIVRNVVADARRYVLAHGRPALHSPAPTARDDHFVQQIVGELSAHSHAIDALVR
HHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ENARALDRSADAIEAGAADADALVLDSALATARTQLIVSKLALHAAERLFEVGGASATAR
HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EHNFDRHWRNLRTIFSHNPLLHKARVVGDYVLNGVTTHLTEGRVF
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]