| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022782
Identifier: 107022782
GI number: 107022782
Start: 1354104
End: 1355375
Strand: Reverse
Name: 107022782
Synonym: Bcen_1229
Alternate gene names: NA
Gene position: 1355375-1354104 (Counterclockwise)
Preceding gene: 107022783
Following gene: 107022781
Centisome position: 41.14
GC content: 59.04
Gene sequence:
>1272_bases ATGAGCAAGATCGTATTTACGAACGTCAACATTTTCGACGGGAGCGGAGCAGATCCCTATAAAGGCGAAGTCCTCATCGA AAATGATCGAATCAAGTCTGTGTCGAAAGGCGGCGACGTCATGCGCCCCGCAGACGCGCAGATCGTCGATGGTCGAGGCA AGTTCGTCATGCCCGGCATGACGGAAGCACACACCCACTTCTCGTGGAACGACCAGCCGACGCTTGCGGCTATCCAGTTC ATGCCGCCGGAGGAGCATATTCTCTGGTGTGTACGGGTCGCAAAGCGCTATCTGGACATGGGCTTTACGTCGGCGCTCGG AGCCGCGGCGGCCAAGCCGCGCCTCGACGTCGTGTTGCGCAACGCTATCAACGCGGGCGAATTTCCCGGCCCGCGTTATC TCGCGGGCAGTCAGGAAATCACGACGTTGGGCGGCTTGGGCGACAACACGCTTCCGCACCTCCCGTATCGTGAGCTCAAC TTCGGGGAGGTTGTCAGCGGTCCGGAAGAGGTCCGCCGCGCGACTCGCATGTTTGTGAAGTACGGCGTTGATCACCTGAA AATCAACCTTTCCGGCGAGTATATCGCCGGCATTCCGGCCGAAGCATCGCCGTTCTCGGAAGAAGAAATCGCGATGTTGA GCGCCGAAGCGAAACGTGCCGGCAAACGTGTAGCAGCCCATGCCTGTTCGAGCGAGTCAGTGAAGCAGTGTGTCCGACAC GGCTTTGAACTGGTCTTTCACGCAAGCTTCGCGGACGAGGAAGCCCTGGACATGCTGGAAGCGAACAAGGACAGGCATAT CGTCGCCCCGGGGATCGGCTGGCTCGTAAGTACGCTTTACCACGCGGAGCAGTGGGGTATCACCGAAGCGATCGCAACGA AGATGGGCTATGCACGTGAACTGGAGATAGCTTCCGAGACGCTCACCAAAATGCACAAGCGTGGAATTCGCATCGCGCCG GGAGGCGATTACGGGTTCGCGTGGATGCCGCATGGCACCAACTCCCGCGACCTCGAACATTTCGTCAAGTACATCGGCAT GACGCCGAAAGAGGCCTTGCTAGCCGCGACCCGCCTGGGAAGCGACGTCATGATGCACTCCGAAATCGGGCAAATCCGCG ACGGATACGTGGCCGACATCGTGTTCGTCGACGGAAATCCACTGGACGATCTGAAGGTTCTGCAAGATCCGGCCAAGATC GTCGCGGTGCTGCAAGCAGGCGAGTTTCGTAAGGGCGGGTCCGGGCTTCAGCATCAGCTCGAGCAACTGTAA
Upstream 100 bases:
>100_bases GCGGCCATTGGACCACGTTCGAGAAGCCCGCCGAGTGCATCGCCGAACTCAAGGCGTTCTACGACAACGACAAGTAATTC GCTGAGGCTTTGGAGGAGAC
Downstream 100 bases:
>100_bases TCAAGACTGGAAGCACGATGCAGCACGAGCGCGTCAGGCACGCTCGTGCTCGCGCACGGTTCTCAGAAGCTGACTAATCA AGCGGCGGAATCCCGCATGT
Product: amidohydrolase
Products: NA
Alternate protein names: Xaa-Pro Dipeptidase; Amidohydrolase Family Protein; Prolidase; Amidohydrolase Family; Secreted Hydrolase; Imidazolonepropionase; Xaa-Pro Dipeptidase Family; M38 Family Peptidase; Parathion Hydrolase; Metal-Dependent Amidohydrolase; Amidohydrolase Domain Protein; Aryldialkylphosphatase Related Protein; X-Pro Dipeptidase; Aryldialkylphosphatase; Dipeptidase; Metallo-Dependent Hydrolase; Amidase; Aryldialkylphosphatase-Related Protein; M38 Familypeptidase; Metal-Dependent Hydrolase; Amidohydrolase Imidazolonepropionase; Xaa-Arg/Lys Peptidase; Amidohydrolase Domain-Containing Protein; Pro-Hyp Dipeptidase; Exported Adenine Deaminase-Like Amidohydrolase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSKIVFTNVNIFDGSGADPYKGEVLIENDRIKSVSKGGDVMRPADAQIVDGRGKFVMPGMTEAHTHFSWNDQPTLAAIQF MPPEEHILWCVRVAKRYLDMGFTSALGAAAAKPRLDVVLRNAINAGEFPGPRYLAGSQEITTLGGLGDNTLPHLPYRELN FGEVVSGPEEVRRATRMFVKYGVDHLKINLSGEYIAGIPAEASPFSEEEIAMLSAEAKRAGKRVAAHACSSESVKQCVRH GFELVFHASFADEEALDMLEANKDRHIVAPGIGWLVSTLYHAEQWGITEAIATKMGYARELEIASETLTKMHKRGIRIAP GGDYGFAWMPHGTNSRDLEHFVKYIGMTPKEALLAATRLGSDVMMHSEIGQIRDGYVADIVFVDGNPLDDLKVLQDPAKI VAVLQAGEFRKGGSGLQHQLEQL
Sequences:
>Translated_423_residues MSKIVFTNVNIFDGSGADPYKGEVLIENDRIKSVSKGGDVMRPADAQIVDGRGKFVMPGMTEAHTHFSWNDQPTLAAIQF MPPEEHILWCVRVAKRYLDMGFTSALGAAAAKPRLDVVLRNAINAGEFPGPRYLAGSQEITTLGGLGDNTLPHLPYRELN FGEVVSGPEEVRRATRMFVKYGVDHLKINLSGEYIAGIPAEASPFSEEEIAMLSAEAKRAGKRVAAHACSSESVKQCVRH GFELVFHASFADEEALDMLEANKDRHIVAPGIGWLVSTLYHAEQWGITEAIATKMGYARELEIASETLTKMHKRGIRIAP GGDYGFAWMPHGTNSRDLEHFVKYIGMTPKEALLAATRLGSDVMMHSEIGQIRDGYVADIVFVDGNPLDDLKVLQDPAKI VAVLQAGEFRKGGSGLQHQLEQL >Mature_422_residues SKIVFTNVNIFDGSGADPYKGEVLIENDRIKSVSKGGDVMRPADAQIVDGRGKFVMPGMTEAHTHFSWNDQPTLAAIQFM PPEEHILWCVRVAKRYLDMGFTSALGAAAAKPRLDVVLRNAINAGEFPGPRYLAGSQEITTLGGLGDNTLPHLPYRELNF GEVVSGPEEVRRATRMFVKYGVDHLKINLSGEYIAGIPAEASPFSEEEIAMLSAEAKRAGKRVAAHACSSESVKQCVRHG FELVFHASFADEEALDMLEANKDRHIVAPGIGWLVSTLYHAEQWGITEAIATKMGYARELEIASETLTKMHKRGIRIAPG GDYGFAWMPHGTNSRDLEHFVKYIGMTPKEALLAATRLGSDVMMHSEIGQIRDGYVADIVFVDGNPLDDLKVLQDPAKIV AVLQAGEFRKGGSGLQHQLEQL
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=346, Percent_Identity=24.8554913294798, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46315; Mature: 46184
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIVFTNVNIFDGSGADPYKGEVLIENDRIKSVSKGGDVMRPADAQIVDGRGKFVMPGM CCCEEEEEEEEECCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCEEECCCCCEEECCC TEAHTHFSWNDQPTLAAIQFMPPEEHILWCVRVAKRYLDMGFTSALGAAAAKPRLDVVLR CHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH NAINAGEFPGPRYLAGSQEITTLGGLGDNTLPHLPYRELNFGEVVSGPEEVRRATRMFVK HHCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH YGVDHLKINLSGEYIAGIPAEASPFSEEEIAMLSAEAKRAGKRVAAHACSSESVKQCVRH HCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GFELVFHASFADEEALDMLEANKDRHIVAPGIGWLVSTLYHAEQWGITEAIATKMGYARE CCEEEEEECCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHH LEIASETLTKMHKRGIRIAPGGDYGFAWMPHGTNSRDLEHFVKYIGMTPKEALLAATRLG HHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC SDVMMHSEIGQIRDGYVADIVFVDGNPLDDLKVLQDPAKIVAVLQAGEFRKGGSGLQHQL CHHEEHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHH EQL HCC >Mature Secondary Structure SKIVFTNVNIFDGSGADPYKGEVLIENDRIKSVSKGGDVMRPADAQIVDGRGKFVMPGM CCEEEEEEEEECCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCEEECCCCCEEECCC TEAHTHFSWNDQPTLAAIQFMPPEEHILWCVRVAKRYLDMGFTSALGAAAAKPRLDVVLR CHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH NAINAGEFPGPRYLAGSQEITTLGGLGDNTLPHLPYRELNFGEVVSGPEEVRRATRMFVK HHCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH YGVDHLKINLSGEYIAGIPAEASPFSEEEIAMLSAEAKRAGKRVAAHACSSESVKQCVRH HCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GFELVFHASFADEEALDMLEANKDRHIVAPGIGWLVSTLYHAEQWGITEAIATKMGYARE CCEEEEEECCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHH LEIASETLTKMHKRGIRIAPGGDYGFAWMPHGTNSRDLEHFVKYIGMTPKEALLAATRLG HHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC SDVMMHSEIGQIRDGYVADIVFVDGNPLDDLKVLQDPAKIVAVLQAGEFRKGGSGLQHQL CHHEEHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHH EQL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA