Click here to switch to the map view.

The map label for this gene is 107022781

Identifier: 107022781

GI number: 107022781

Start: 1353137

End: 1353919

Strand: Reverse

Name: 107022781

Synonym: Bcen_1228

Alternate gene names: NA

Gene position: 1353919-1353137 (Counterclockwise)

Preceding gene: 107022782

Following gene: 107022780

Centisome position: 41.1

GC content: 51.21

Gene sequence:

>783_bases
ATGGACAAGAATTTTGGATCATGGATGAGGGTGCTCATCACGATGCTGGTTGGCTTCCTCAGTACGTCCGCGATGGCCCA
GAATTTCGCCGTCAACAACTTCAACTTCCTGTACACGAATCGTTCTAGCCCGGATCCTATCTATGGCTATGGAACAGGCA
ACGGGAACCTGCAGACGTATCAATTTGAACACTTCAGCGGCAATCAGTTTGGCGATATCTATTTCGACGCCGAGCTTTAC
CATGGCAACAACGTTGGCGCTCCGTTCAGTAACGCGAACTTCCAGAACCTTCTGGTGTTTAACCCGCGACTTAGCTTCGG
AAAAACGCTCGGGAAAGACTTGTCCGTCGGTCCGATTTCCGACGTATCGCTCATCGCCCGATGGGAGCGGGGAAGCTATC
CCGATACGGACCATTTCGAGTCTCAGAACTACGGCTTGTCGCTCAATTTCAAGGTCCCGGGTTTCGCATGGTTCGAGTCA
GGTATGCTTTACCGAAACACGAACTTCGATAAGCATACGTGGCTGTGGCGATCGGTGCTGCTCTCGAACCCTATCGAAGT
AGGTGGTCAGAAATTCCACTTCAACCTTCTGTCGCTCATCAATGGTTCTAACCATAACGGGACCGAGGTATTCGAGCGAG
CGGAGCTTCTGTGGGAGATCTTCGGCAAGCCGCAGTACCAACTCGGTGCTCGCTTCGAGTTCATGCATTACAACAACAAT
CCCGTCGGCGGTGGGACCTACAACAAGTACATGCCGGAAATAATGTTTAAGTATACGCTTTGA

Upstream 100 bases:

>100_bases
GCGGAATCCCGCATGTAGGTAAGACAAAGATCTCACCGTGGGCGTGATACAGCGCGGCGCGTTTAATACATTAGTTATAC
TAATAAATTAAGGAGACGAT

Downstream 100 bases:

>100_bases
TTTAACTAGTTGACCGGCGAACATGCCGGCCGATGAGGTGATCAACGCTATTCCACCGAGGTGGGTCGAATTCTGGCTTT
CACAGTTGGTCTACCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDKNFGSWMRVLITMLVGFLSTSAMAQNFAVNNFNFLYTNRSSPDPIYGYGTGNGNLQTYQFEHFSGNQFGDIYFDAELY
HGNNVGAPFSNANFQNLLVFNPRLSFGKTLGKDLSVGPISDVSLIARWERGSYPDTDHFESQNYGLSLNFKVPGFAWFES
GMLYRNTNFDKHTWLWRSVLLSNPIEVGGQKFHFNLLSLINGSNHNGTEVFERAELLWEIFGKPQYQLGARFEFMHYNNN
PVGGGTYNKYMPEIMFKYTL

Sequences:

>Translated_260_residues
MDKNFGSWMRVLITMLVGFLSTSAMAQNFAVNNFNFLYTNRSSPDPIYGYGTGNGNLQTYQFEHFSGNQFGDIYFDAELY
HGNNVGAPFSNANFQNLLVFNPRLSFGKTLGKDLSVGPISDVSLIARWERGSYPDTDHFESQNYGLSLNFKVPGFAWFES
GMLYRNTNFDKHTWLWRSVLLSNPIEVGGQKFHFNLLSLINGSNHNGTEVFERAELLWEIFGKPQYQLGARFEFMHYNNN
PVGGGTYNKYMPEIMFKYTL
>Mature_260_residues
MDKNFGSWMRVLITMLVGFLSTSAMAQNFAVNNFNFLYTNRSSPDPIYGYGTGNGNLQTYQFEHFSGNQFGDIYFDAELY
HGNNVGAPFSNANFQNLLVFNPRLSFGKTLGKDLSVGPISDVSLIARWERGSYPDTDHFESQNYGLSLNFKVPGFAWFES
GMLYRNTNFDKHTWLWRSVLLSNPIEVGGQKFHFNLLSLINGSNHNGTEVFERAELLWEIFGKPQYQLGARFEFMHYNNN
PVGGGTYNKYMPEIMFKYTL

Specific function: Unknown

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29769; Mature: 29769

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNFGSWMRVLITMLVGFLSTSAMAQNFAVNNFNFLYTNRSSPDPIYGYGTGNGNLQTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEEEECCCCCEEEE
QFEHFSGNQFGDIYFDAELYHGNNVGAPFSNANFQNLLVFNPRLSFGKTLGKDLSVGPIS
EEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCC
DVSLIARWERGSYPDTDHFESQNYGLSLNFKVPGFAWFESGMLYRNTNFDKHTWLWRSVL
CCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCEEEECCCCCHHHHHHHHHH
LSNPIEVGGQKFHFNLLSLINGSNHNGTEVFERAELLWEIFGKPQYQLGARFEFMHYNNN
HCCCHHCCCCEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCC
PVGGGTYNKYMPEIMFKYTL
CCCCCCHHHHHHHEEEEECC
>Mature Secondary Structure
MDKNFGSWMRVLITMLVGFLSTSAMAQNFAVNNFNFLYTNRSSPDPIYGYGTGNGNLQTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEEEECCCCCEEEE
QFEHFSGNQFGDIYFDAELYHGNNVGAPFSNANFQNLLVFNPRLSFGKTLGKDLSVGPIS
EEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCC
DVSLIARWERGSYPDTDHFESQNYGLSLNFKVPGFAWFESGMLYRNTNFDKHTWLWRSVL
CCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCEEEECCCCCHHHHHHHHHH
LSNPIEVGGQKFHFNLLSLINGSNHNGTEVFERAELLWEIFGKPQYQLGARFEFMHYNNN
HCCCHHCCCCEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCC
PVGGGTYNKYMPEIMFKYTL
CCCCCCHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA