| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022357
Identifier: 107022357
GI number: 107022357
Start: 867026
End: 867379
Strand: Reverse
Name: 107022357
Synonym: Bcen_0801
Alternate gene names: NA
Gene position: 867379-867026 (Counterclockwise)
Preceding gene: 107022359
Following gene: 107022356
Centisome position: 26.33
GC content: 62.99
Gene sequence:
>354_bases ATGCCCCGCCAGACGGGCGATTCCGGGCAATTTGCACGATCATCCGTCATCGTGCTATCATGTCGCCTGTTTCAACATTC AATCTCTGTCTTTTCGATTTTGAGCGAAGTCCGTCCGCACGTTGCGGCCCGGTGCCTCGATCGAAATTGCATCCACAGGA AAGCCCGCCCGACAGGCCCGCTTTTCTCGTTTCGCTGCCCCTCCGGGGCGTTGCCGGCACGCCGGACCCATCGTCCGCAC CGGCATCCGCCGCCTGCATCACGCGGCCCATTCTTCATGAGCGCACTGTCGCGACGGCCCATCGGGCCCGCGTCGAAGCA GCCCCTTGGCCCTTTGCTGCCCCCTGTGCAGTAA
Upstream 100 bases:
>100_bases ATCAGTTCGGTCATCCGGTTCCTCGCGAATTCAGCCCCGTCGCGGCGGCCGGCACGGCCGCGCCGCGCGCCGCCGATCAT ACCCGAGCAGGCTCCCCGGG
Downstream 100 bases:
>100_bases GTGCTTAATGGTCTGCCCCGACGCGCAGCACACGACACCGCGCTCGCCGGCAAACCGTGTCGGACGGCCTGCCCGTTCCG GCGCTGTCAAAGGAGTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGPLFSFRCPSGALPARRTHRPH RHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ
Sequences:
>Translated_117_residues MPRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGPLFSFRCPSGALPARRTHRPH RHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ >Mature_116_residues PRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGPLFSFRCPSGALPARRTHRPHR HPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12920; Mature: 12789
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LFSFRCPSGALPARRTHRPHRHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LFSFRCPSGALPARRTHRPHRHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA