Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107022104

Identifier: 107022104

GI number: 107022104

Start: 590410

End: 591444

Strand: Reverse

Name: 107022104

Synonym: Bcen_0547

Alternate gene names: NA

Gene position: 591444-590410 (Counterclockwise)

Preceding gene: 107022106

Following gene: 107022101

Centisome position: 17.95

GC content: 71.59

Gene sequence:

>1035_bases
ATGTCACGATTTGCGACGACATTTCCGCGCCGCGCCGGCACGGTCGACCGTGTCGCACGACGTACCCCTTTCATGATCCC
ATCGCCCCTCGTCCCGGTCGAAGGCGCGCTCGCCCGCCCTCGCATCAACCCGCTCGATCAGGTCCCGCCGTTCGGTCGCG
AATGGCGATTTCTCGGTGCCCCCGGTGCACGGTCCAGCAAGAACTGCCTTGCGACACTGACGACGTCCTGCATCGACGTC
GACTGGCCGCACTCCGCATGCCGGTGGCAGCCACTGCCGGCGAGTGCGCTGCCGGCTTCTGGCGGGCTGCCTGCCCCGCC
GGCTGCGGCCACCGGTCGGCGCTTGCGCCATCGCCGCCCTCGTGACCGGCGCGCGATGTACGCGCTCTACTGGAGCATCG
GCGCACTCGGCATCATCGGCTGGCTGATCGGCACGTACGACCCGCCCGCGGGCTTCGGTCCCGCGTATGCGATTCAAGCG
ACCGGCGGTGTGGCCGATCACGTCACGACGTCGACCGGCACCATACATATGGCCGCGACTCACCCGGCCACCTCGACGAA
CGCCGTGCCGCAGCGCAAGGTCGCGGCGCCTGTCGCGAACACGATGAAAACGCCGCCCGCCACGCACCGCGCCCCGCTTC
GCCCCGCATCGCTTCATCCGCAAACGGCGTCCGACATGCGGCACGCCGCGCCTGCGTCGCCCCGTCGGGCAACCGGCCAG
CGCACGATGCCGGCACCGTCCCACACACCGGTCGTGCCGCGACTCGCCGCACATCCGCCGACCCAGCGTGCGCCGCTCCA
GCGCGCTGCGACCAACGCCGGCACACACGATCGGCTCGCTCCGCCGCCGCGCACGGCAGACACGCGCGATACACGCGACT
CGCTCGACGATCCGGCCACGCTGATCGCCATGGCGAACGCGCTGCGCGCCACGCAGCCGGCCCGCCCGGCGCACCCGAGC
GCGACCGGTTTCGACTGGACGTCGCAACTGTCGCACCGCCGCGTGACCGACGTGCCGGACGCGTTCGCGCACTGA

Upstream 100 bases:

>100_bases
CCTGTCACGACCGTCGCGGCATCCGCCTCGTACAAGTCGCCCCCAAAAAGGCACAAGAATCAGATTGATCTGATCGACCT
GCCTTCGCCGGCTGACCACA

Downstream 100 bases:

>100_bases
CGCCCGCGCAATAAAAAACCCGGCGAAGATCGCTTCGCCGGGTTTTCGTTCGTCTCGCTCCGTCCGTTCGACGAATCGTT
ACTTGTGCATGGGCAGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSRFATTFPRRAGTVDRVARRTPFMIPSPLVPVEGALARPRINPLDQVPPFGREWRFLGAPGARSSKNCLATLTTSCIDV
DWPHSACRWQPLPASALPASGGLPAPPAAATGRRLRHRRPRDRRAMYALYWSIGALGIIGWLIGTYDPPAGFGPAYAIQA
TGGVADHVTTSTGTIHMAATHPATSTNAVPQRKVAAPVANTMKTPPATHRAPLRPASLHPQTASDMRHAAPASPRRATGQ
RTMPAPSHTPVVPRLAAHPPTQRAPLQRAATNAGTHDRLAPPPRTADTRDTRDSLDDPATLIAMANALRATQPARPAHPS
ATGFDWTSQLSHRRVTDVPDAFAH

Sequences:

>Translated_344_residues
MSRFATTFPRRAGTVDRVARRTPFMIPSPLVPVEGALARPRINPLDQVPPFGREWRFLGAPGARSSKNCLATLTTSCIDV
DWPHSACRWQPLPASALPASGGLPAPPAAATGRRLRHRRPRDRRAMYALYWSIGALGIIGWLIGTYDPPAGFGPAYAIQA
TGGVADHVTTSTGTIHMAATHPATSTNAVPQRKVAAPVANTMKTPPATHRAPLRPASLHPQTASDMRHAAPASPRRATGQ
RTMPAPSHTPVVPRLAAHPPTQRAPLQRAATNAGTHDRLAPPPRTADTRDTRDSLDDPATLIAMANALRATQPARPAHPS
ATGFDWTSQLSHRRVTDVPDAFAH
>Mature_343_residues
SRFATTFPRRAGTVDRVARRTPFMIPSPLVPVEGALARPRINPLDQVPPFGREWRFLGAPGARSSKNCLATLTTSCIDVD
WPHSACRWQPLPASALPASGGLPAPPAAATGRRLRHRRPRDRRAMYALYWSIGALGIIGWLIGTYDPPAGFGPAYAIQAT
GGVADHVTTSTGTIHMAATHPATSTNAVPQRKVAAPVANTMKTPPATHRAPLRPASLHPQTASDMRHAAPASPRRATGQR
TMPAPSHTPVVPRLAAHPPTQRAPLQRAATNAGTHDRLAPPPRTADTRDTRDSLDDPATLIAMANALRATQPARPAHPSA
TGFDWTSQLSHRRVTDVPDAFAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36777; Mature: 36646

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFATTFPRRAGTVDRVARRTPFMIPSPLVPVEGALARPRINPLDQVPPFGREWRFLGA
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECC
PGARSSKNCLATLTTSCIDVDWPHSACRWQPLPASALPASGGLPAPPAAATGRRLRHRRP
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCC
RDRRAMYALYWSIGALGIIGWLIGTYDPPAGFGPAYAIQATGGVADHVTTSTGTIHMAAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHEECCCCEEEEEEC
HPATSTNAVPQRKVAAPVANTMKTPPATHRAPLRPASLHPQTASDMRHAAPASPRRATGQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
RTMPAPSHTPVVPRLAAHPPTQRAPLQRAATNAGTHDRLAPPPRTADTRDTRDSLDDPAT
CCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
LIAMANALRATQPARPAHPSATGFDWTSQLSHRRVTDVPDAFAH
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCC
>Mature Secondary Structure 
SRFATTFPRRAGTVDRVARRTPFMIPSPLVPVEGALARPRINPLDQVPPFGREWRFLGA
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECC
PGARSSKNCLATLTTSCIDVDWPHSACRWQPLPASALPASGGLPAPPAAATGRRLRHRRP
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCC
RDRRAMYALYWSIGALGIIGWLIGTYDPPAGFGPAYAIQATGGVADHVTTSTGTIHMAAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHEECCCCEEEEEEC
HPATSTNAVPQRKVAAPVANTMKTPPATHRAPLRPASLHPQTASDMRHAAPASPRRATGQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
RTMPAPSHTPVVPRLAAHPPTQRAPLQRAATNAGTHDRLAPPPRTADTRDTRDSLDDPAT
CCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
LIAMANALRATQPARPAHPSATGFDWTSQLSHRRVTDVPDAFAH
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA