Click here to switch to the map view.

The map label for this gene is ctrC [H]

Identifier: 107021851

GI number: 107021851

Start: 325314

End: 326096

Strand: Reverse

Name: ctrC [H]

Synonym: Bcen_0293

Alternate gene names: 107021851

Gene position: 326096-325314 (Counterclockwise)

Preceding gene: 107021853

Following gene: 107021850

Centisome position: 9.9

GC content: 55.43

Gene sequence:

>783_bases
ATGTCGCTTCTTCATCGAGTTCTCCTTGCCTCTAGGATAAGAGAACTCACTTGCCGTTTGGCTACACGATCCGTCTCAGG
TCAACGCCACAATTTCGGCTTTCTGTGGCTCTTTCTCGAGCCGATGATGTTCACGTCGGGGGTCACGATCGTCTGGTCCC
TCGGACACTTCACCCACGGCTCGAATCTGCCCATCGCCGGCTTCGCCGTAACTGGCTACTCGTCACTGCTTGTCTGGCGA
AATTCTGGGAATCGGTGTTCGAAGGCGATTGAACCAAACCTGAGTTTGCTATACCACCGCAACGTCCGGGTGCTCGACGT
CTTCCTGTCACGCCTGATTCTCGAGACAGCAGGCGCGACAGCATCTCTGTCGCTCCTGATCCTTATCTTTACCGCGCTCG
GCTTAGCTACGTTTCCTGCAGACCTACTCACAATGACGACCGGCTGGCTGTTGCAATGCTGGTTCGCATTCGCCATCGGC
CTTACAATCGGTGCGGCATCGGAGCGCTCGGAGGTGTTTGAGCGAGTATGGCACACCGCCACGTACCTGCTCTTCCCGTT
CTCGGGTGCTGTCTTCATGGTCGACTGGCTACCCAAAGCTGTCCACCCGTACATTCTCGTATTGCCAATGGTTCACGGCG
CCGAAATGATCCGGCACGGCTATTTTGGAAACATTGTCCGAACCCATGAAGATCCAATCTATTTCATCGCCGCCAATTCG
GTGCTTACGCTGATCGGAATGATGCTCGTCAGGGACGTCAGCAAGCGTGTGGAGCCCGAATGA

Upstream 100 bases:

>100_bases
AGAACGTCTGCTCCGAGATGTTGTGCCGCTTGCACAGATCCTTGACCGGTACCTCCTGGCTCTCGGCTTCCCGCAGGATG
CGGATGATCTGTTCGTCGGT

Downstream 100 bases:

>100_bases
TCGCGATCAAAGCTGTTACAAAGGTATATCACACCCGCCAAGGCCCGCGCGTCGTTCTTGACCAGATCGACCTGAATGTC
CAGAGAGGAGAAAAAATCGG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSLLHRVLLASRIRELTCRLATRSVSGQRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPIAGFAVTGYSSLLVWR
NSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIG
LTIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIVRTHEDPIYFIAANS
VLTLIGMMLVRDVSKRVEPE

Sequences:

>Translated_260_residues
MSLLHRVLLASRIRELTCRLATRSVSGQRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPIAGFAVTGYSSLLVWR
NSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIG
LTIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIVRTHEDPIYFIAANS
VLTLIGMMLVRDVSKRVEPE
>Mature_259_residues
SLLHRVLLASRIRELTCRLATRSVSGQRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPIAGFAVTGYSSLLVWRN
SGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIGL
TIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIVRTHEDPIYFIAANSV
LTLIGMMLVRDVSKRVEPE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29114; Mature: 28982

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLHRVLLASRIRELTCRLATRSVSGQRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCC
SNLPIAGFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGAT
CCCCEEEEEECCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCH
ASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIGLTIGAASERSEVFERVWHTA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIVRTHEDPIYFIAANS
HHEEEECCCCEEEEEHHHHHHCCCEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHH
VLTLIGMMLVRDVSKRVEPE
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLLHRVLLASRIRELTCRLATRSVSGQRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCC
SNLPIAGFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGAT
CCCCEEEEEECCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCH
ASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIGLTIGAASERSEVFERVWHTA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIVRTHEDPIYFIAANS
HHEEEECCCCEEEEEHHHHHHCCCEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHH
VLTLIGMMLVRDVSKRVEPE
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]