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The map label for this gene is ctrD [H]

Identifier: 107021850

GI number: 107021850

Start: 324661

End: 325317

Strand: Reverse

Name: ctrD [H]

Synonym: Bcen_0292

Alternate gene names: 107021850

Gene position: 325317-324661 (Counterclockwise)

Preceding gene: 107021851

Following gene: 107021849

Centisome position: 9.87

GC content: 51.6

Gene sequence:

>657_bases
ATGATCGCGATCAAAGCTGTTACAAAGGTATATCACACCCGCCAAGGCCCGCGCGTCGTTCTTGACCAGATCGACCTGAA
TGTCCAGAGAGGAGAAAAAATCGGCATCCTCGGACGCAATGGCGCAGGAAAATCGACGCTAATCCGGATGATCAGCGGCG
CCGAATTTCCAACCTCTGGCGACATTGAGCGCAATATGACCATTTCATGGCCGCTCGCGTTCGGTGGAGCATTTCAGGGC
AGCCTCACTGGGTACGATAACCTTCGATTCATTTGCCGCATCTACGGCGTGGATTTCACTAAGGTAGCGCCTTACGTGGA
TGATTTTTCCGAACTCGGCATGTACTTGCGGGAACCGGTCAAAAAATACTCGTCGGGGATGCGGGCTCGGCTCGCGTTCG
CAATTTCCTTGGCAGTCGACTTCGATTGCTTCTTGATCGATGAAATTGTAGCCGTTGGTGATGCGCGCTTTCACGCGAAA
TGCCATAACGAATTATTCGAAAAGAGAAAGGATCGCGCCATGATTATCGTTTCCCACGATGCCGGATACATGCGCGAACA
TTGCGATCGGGCCGCCGTACTCGTGTCTGGGAAGTTGCACAATTTTGACACGGTCGACAACGCACTTGATTTCTACTACA
ACGAATCCAATGCTTGA

Upstream 100 bases:

>100_bases
GAACCCATGAAGATCCAATCTATTTCATCGCCGCCAATTCGGTGCTTACGCTGATCGGAATGATGCTCGTCAGGGACGTC
AGCAAGCGTGTGGAGCCCGA

Downstream 100 bases:

>100_bases
ATTTTTGGTGAATTACTATTCCCAAAATTTATTTTAATTAATGTTCGATCGCCCCCCCCCTTTTTAGTGCCAACCGAACC
CGAAATCGATTGATAATTGG

Product: ABC transporter related

Products: NA

Alternate protein names: Capsular-polysaccharide-transporting ATPase [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIAIKAVTKVYHTRQGPRVVLDQIDLNVQRGEKIGILGRNGAGKSTLIRMISGAEFPTSGDIERNMTISWPLAFGGAFQG
SLTGYDNLRFICRIYGVDFTKVAPYVDDFSELGMYLREPVKKYSSGMRARLAFAISLAVDFDCFLIDEIVAVGDARFHAK
CHNELFEKRKDRAMIIVSHDAGYMREHCDRAAVLVSGKLHNFDTVDNALDFYYNESNA

Sequences:

>Translated_218_residues
MIAIKAVTKVYHTRQGPRVVLDQIDLNVQRGEKIGILGRNGAGKSTLIRMISGAEFPTSGDIERNMTISWPLAFGGAFQG
SLTGYDNLRFICRIYGVDFTKVAPYVDDFSELGMYLREPVKKYSSGMRARLAFAISLAVDFDCFLIDEIVAVGDARFHAK
CHNELFEKRKDRAMIIVSHDAGYMREHCDRAAVLVSGKLHNFDTVDNALDFYYNESNA
>Mature_218_residues
MIAIKAVTKVYHTRQGPRVVLDQIDLNVQRGEKIGILGRNGAGKSTLIRMISGAEFPTSGDIERNMTISWPLAFGGAFQG
SLTGYDNLRFICRIYGVDFTKVAPYVDDFSELGMYLREPVKKYSSGMRARLAFAISLAVDFDCFLIDEIVAVGDARFHAK
CHNELFEKRKDRAMIIVSHDAGYMREHCDRAAVLVSGKLHNFDTVDNALDFYYNESNA

Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=224, Percent_Identity=27.2321428571429, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI47078218, Length=224, Percent_Identity=27.2321428571429, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI27436953, Length=209, Percent_Identity=28.2296650717703, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI150417984, Length=215, Percent_Identity=28.3720930232558, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27477115, Length=207, Percent_Identity=27.536231884058, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI116734710, Length=215, Percent_Identity=29.3023255813954, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=26.9767441860465, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=27.9279279279279, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI6005701, Length=207, Percent_Identity=25.6038647342995, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI21536376, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=9e-12,
Organism=Escherichia coli, GI1790467, Length=227, Percent_Identity=30.3964757709251, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789751, Length=191, Percent_Identity=30.3664921465969, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI2367384, Length=189, Percent_Identity=32.2751322751323, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=28.310502283105, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=29.5964125560538, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI87081782, Length=226, Percent_Identity=29.646017699115, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1789032, Length=213, Percent_Identity=24.4131455399061, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081791, Length=214, Percent_Identity=25.7009345794392, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17551700, Length=204, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=208, Percent_Identity=25.4807692307692, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=208, Percent_Identity=25.4807692307692, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=208, Percent_Identity=25.4807692307692, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI116007184, Length=187, Percent_Identity=29.9465240641711, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221500365, Length=188, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582014, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24582012, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007328, Length=215, Percent_Identity=26.5116279069767, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574150, Length=215, Percent_Identity=26.5116279069767, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643672, Length=215, Percent_Identity=24.1860465116279, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: =3.6.3.38 [H]

Molecular weight: Translated: 24431; Mature: 24431

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIKAVTKVYHTRQGPRVVLDQIDLNVQRGEKIGILGRNGAGKSTLIRMISGAEFPTSG
CEEHHHHHHHHHCCCCCEEEEEEECCEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCC
DIERNMTISWPLAFGGAFQGSLTGYDNLRFICRIYGVDFTKVAPYVDDFSELGMYLREPV
CCCCCEEEEEEEEECCCCCCCCCCCCHHEEEEHEECCCHHHHCCCCCCHHHHHHHHHHHH
KKYSSGMRARLAFAISLAVDFDCFLIDEIVAVGDARFHAKCHNELFEKRKDRAMIIVSHD
HHHHCCHHHHHEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECC
AGYMREHCDRAAVLVSGKLHNFDTVDNALDFYYNESNA
CHHHHHHCCCEEEEEECCCCCCCHHHHHHHHEECCCCC
>Mature Secondary Structure
MIAIKAVTKVYHTRQGPRVVLDQIDLNVQRGEKIGILGRNGAGKSTLIRMISGAEFPTSG
CEEHHHHHHHHHCCCCCEEEEEEECCEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCC
DIERNMTISWPLAFGGAFQGSLTGYDNLRFICRIYGVDFTKVAPYVDDFSELGMYLREPV
CCCCCEEEEEEEEECCCCCCCCCCCCHHEEEEHEECCCHHHHCCCCCCHHHHHHHHHHHH
KKYSSGMRARLAFAISLAVDFDCFLIDEIVAVGDARFHAKCHNELFEKRKDRAMIIVSHD
HHHHCCHHHHHEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECC
AGYMREHCDRAAVLVSGKLHNFDTVDNALDFYYNESNA
CHHHHHHCCCEEEEEECCCCCCCHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]