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The map label for this gene is glcD [H]

Identifier: 107021811

GI number: 107021811

Start: 270533

End: 271891

Strand: Reverse

Name: glcD [H]

Synonym: Bcen_0251

Alternate gene names: 107021811

Gene position: 271891-270533 (Counterclockwise)

Preceding gene: 107021814

Following gene: 107021810

Centisome position: 8.25

GC content: 68.58

Gene sequence:

>1359_bases
ATGCTCGATGCGCTGCGCGCCGCCTTCGGCGAGCGCGTGTCGACCGCCGACGCGGTCCGCGCCCATCACGGCCGCGACGA
ATCCCCGTTCGATCCGCAACTGCCCGACGCCGTCGTGTTCGCGCGCAGCACCGACGACGTGCGCGAAGTCGTGTCGCTGT
GTTCGCTCTACAGCGTGCCGCTGATCCCGTACGGCGCCGGCTCGTCGCTCGAAGGTCACCTGCTCGCGGTGCGCGGCGGC
GTGTCGCTCGATTTGTCGGAAATGAACCGCGTGCTGTCGATCAACGCCGAGGACCTGACCGTGACGGTCGAGCCCGGCAT
CACGCGCAAGGCGCTCAACGAAGCGCTGCGCGACACCGGCCTGTTCTTCCCCATCGATCCGGGCGCCGACGCCAGCATTG
GCGGGATGACGGCCACGCGTGCATCGGGCACCAACGCCGTCCGCTACGGCACGATGCGCGAGAACGTGCTCGGCCTGACC
GCGGTGCTCGCGGACGGCCGCGTGGTCAAAACCGGTTCCCGCGCGCGCAAGTCGTCGGCCGGCTACGACCTCACGCGGCT
GTTCGTCGGGTCCGAAGGCACGCTCGGCGTGATCACCGAAATCACGCTGCGCCTGCACCCGCTGCCCGAAGCCGTGTCGG
CCGCGATCTGCACGTTCCCGACGATGGGCGACGCGGTGCGCACGGTGATCGAGACGATCCAGATCGGCGTGCCGATCGCG
CGCGTCGAATTCGTCGATGCGCTCGCGGTACGCTCGATCAACCGCCACTCGAACCTGACGCTGACCGAAGCGCCGACGCT
GTTCTTCGAATTCCACGGCACCGAGGCCGGCGTGAAGGAACAGGCCGAACTCGTGCAGGCGCTCGCCGGCCAGAACGCCG
GCCAGGGCTTCGAATGGGCGACCCGCCCCGAGGATCGCACGCGGCTCTGGTCCGCGCGCCACAACGCGTACTTCGCGATG
CTGCAGCTGAAGCCCGGCTGCCGCGCGGTGACGACCGACGTGTGCGTACCGATCTCGCAGCTCGCCGCGTGCGTCGAGGA
AACCGAGGTCGACCTGCGCGCGTCGTCGCTGCCCTGCCCGATCGTCGGCCACGTCGGCGACGGCAATTTCCACGTCGCGA
TCCTGATCGATCCCGACAAGCCCGAGGAACTCGCCGAAGCCGAGCACATCAACGACCGGATCGTCGAGCGCGCGCTGCGG
CTGGGCGGTACCTGCACGGGCGAGCACGGCATCGGGCTGCACAAGATGCGCTTCCTGCCGAAGGAGCACGGCGACAACGC
GATCGACACGATGCGCGCGATCAAGCTCGCGCTCGATCCGCGCAACCTGATGAATCCAGGCAAGATTTTCACGTGCTGA

Upstream 100 bases:

>100_bases
TTACGGCGTAGAATGGGCCGACAGTTCGACAAGCAGTCAGGAGACATTCGTGAATCACCCTGCCCCGCCGGCCGCCACGC
GCCGCCCGCTGCCCCCCGCC

Downstream 100 bases:

>100_bases
CCCGGCGGCGCGAGCTCGCGCCGCACGCAGGAGACCTCATGAACGCTCCCGTCGAACTGTCGAGCGCCGCACGCGCGCAG
CGTCAGCGCGAAGTCGTGCA

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGG
VSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLT
AVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMGDAVRTVIETIQIGVPIA
RVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWATRPEDRTRLWSARHNAYFAM
LQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALR
LGGTCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC

Sequences:

>Translated_452_residues
MLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGG
VSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLT
AVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMGDAVRTVIETIQIGVPIA
RVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWATRPEDRTRLWSARHNAYFAM
LQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALR
LGGTCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
>Mature_452_residues
MLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGG
VSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLT
AVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMGDAVRTVIETIQIGVPIA
RVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWATRPEDRTRLWSARHNAYFAM
LQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALR
LGGTCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=454, Percent_Identity=53.0837004405286, Blast_Score=495, Evalue=1e-140,
Organism=Homo sapiens, GI37595754, Length=477, Percent_Identity=50.5241090146751, Blast_Score=486, Evalue=1e-137,
Organism=Homo sapiens, GI119964728, Length=419, Percent_Identity=29.3556085918854, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI4501993, Length=220, Percent_Identity=32.2727272727273, Blast_Score=119, Evalue=5e-27,
Organism=Escherichia coli, GI1789351, Length=423, Percent_Identity=31.6784869976359, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1787977, Length=522, Percent_Identity=28.9272030651341, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI48994907, Length=175, Percent_Identity=34.8571428571429, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI48994914, Length=176, Percent_Identity=31.25, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71992373, Length=443, Percent_Identity=46.9525959367946, Blast_Score=425, Evalue=1e-119,
Organism=Caenorhabditis elegans, GI71992381, Length=443, Percent_Identity=45.823927765237, Blast_Score=407, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI71992392, Length=381, Percent_Identity=48.8188976377953, Blast_Score=384, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17534361, Length=433, Percent_Identity=26.7898383371824, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17556096, Length=456, Percent_Identity=25.8771929824561, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320027, Length=453, Percent_Identity=40.6181015452539, Blast_Score=338, Evalue=8e-94,
Organism=Saccharomyces cerevisiae, GI6320764, Length=443, Percent_Identity=27.765237020316, Blast_Score=148, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320023, Length=468, Percent_Identity=24.1452991452991, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI18921117, Length=424, Percent_Identity=27.3584905660377, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24639277, Length=424, Percent_Identity=27.3584905660377, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24639275, Length=424, Percent_Identity=27.3584905660377, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24653753, Length=461, Percent_Identity=27.9826464208243, Blast_Score=131, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 48574; Mature: 48574

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVP
CCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCC
LIPYGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTG
CEECCCCCCCCCEEEEEECCCEEEHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCC
LFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSA
CEEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHEEECCCCEEEECCCHHHHCCC
GYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMGDAVRTVIETIQIGVPIA
CCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH
RVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWA
HHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
TRPEDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCP
CCCCHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
IVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALRLGGTCTGEHGIGLHKMRFLP
EEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
KEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
HHCCCHHHHHHHHHHEEECCHHHCCCCCEEEC
>Mature Secondary Structure
MLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVP
CCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCC
LIPYGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTG
CEECCCCCCCCCEEEEEECCCEEEHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCC
LFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSA
CEEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHEEECCCCEEEECCCHHHHCCC
GYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMGDAVRTVIETIQIGVPIA
CCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH
RVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWA
HHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
TRPEDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCP
CCCCHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
IVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALRLGGTCTGEHGIGLHKMRFLP
EEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
KEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
HHCCCHHHHHHHHHHEEECCHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]