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The map label for this gene is glcD [H]

Identifier: 107021810

GI number: 107021810

Start: 269001

End: 270494

Strand: Reverse

Name: glcD [H]

Synonym: Bcen_0250

Alternate gene names: 107021810

Gene position: 270494-269001 (Counterclockwise)

Preceding gene: 107021811

Following gene: 107021809

Centisome position: 8.21

GC content: 68.47

Gene sequence:

>1494_bases
ATGAACGCTCCCGTCGAACTGTCGAGCGCCGCACGCGCGCAGCGTCAGCGCGAAGTCGTGCAGGCGCTGATGGCCGTACT
GCCGACGCACTGCCTGCTGTACCGCGACGAGGACACCGCGCCGTACGAATGCGACGGCCTGTCCGCGTACCGCCGGCTCC
CGCTCGCGGTCGCGCTGCCCGAGACGGAATCGCAGGTGCAGCGGATCGTGCAGATCTGCCGCCGCATGGAAGTGCCGATC
GTGCCGCGCGGCGCCGGTACGAGCCTGTCGGGCGGCGCGCTGCCGATCGCGCTCGGCGTCGTGCTGTCGCTCGCGCGCTT
CACGCGCATCGTCGAAGTCGATCCGTACGCGCGCACCGCGACCGTGCAGCCCGGCGTGCGCAACCTCGCGATCTCGGAGG
CGGCCGCGCCGTACGGCCTGTATTACGCACCCGATCCGTCGTCGCAGATCGCCTGCACGATCGGCGGCAACGTCGCGGAA
AACTCCGGCGGCGTCCACTGCCTGAAATACGGTCTGACCGTGCACAACGTGATGCGCGTGCGCGCGGTGACGATCGACGG
CGAGGTCGTCGAATTCGGCTCGCTCGCGCTCGACATGCCGGGCCTCGACCTGCTCGCCGTGATGATCGGCAGCGAAGGGA
TGTTCGCGATCGTCACCGAGGTCACGGTACGGCTGATCCCGAAGCCGCAGACCGCGCAGCTCGTGATGGCGAGCTTCGAC
GACGTCGTCAAGGGCGGCGAGGCGGTGGCGGCGATCATCGCGTCGGGCATCATTCCGGCCGGGCTCGAGATGATGGACAG
GCCGGCCACGCAGGCCGTCGAGGCGTTCACGCACGCGGGCTACGACCTCGACGCGAAGGCGATCCTGCTGTGCGAATCGG
ACGGCACGCCGGAAGAAGTCGCCGAGGAAATCGTCCGGATGACGGCCGTGCTGCGCGAACACGGCGCGACGCGCATCCAG
GTGTCGCGCAACGAACACGAGCGGCTGCGCTTCTGGTCCGGCCGCAAGAACGCATTTCCGGCCGCCGGGCGCATTTCCGC
CGATTACTACTGCATGGACGGCACCGTGCCGCGCCGCGCGATCGGCCCGCTGCTCGCACGCATCGAGCAGCTCGAAACCC
GCTACGGGCTGCGCTGCATCAACGTGTTCCATGCGGGCGACGGCAACATGCATCCGCTGATCCTGTACAACGCGAACGAC
CCGGACGAGTTGCACCGCGCCGAGCAGTTCGGCGCGGAAATCCTCGAATGCTGCGTGGAATTCGGCGGCAGTGTGACCGG
CGAGCACGGTGTCGGCATCGAAAAACTCAATTCGATGTGCGTGCAGTTCTCGCCGCAGGAGCGCGACGCGTTCTTCGCGG
TCAAGCGCGCATTCGATCCGGCCGGGCTGCTGAATCCGGACAAGGGCATCCCGACCCGCGCGCGCTGCGCCGAATACGGT
CGCCAGCACGTGCGCGGCGGTCTGTTGCCGCACCCCGACCTGCCGCGCTTCTGA

Upstream 100 bases:

>100_bases
CGATCAAGCTCGCGCTCGATCCGCGCAACCTGATGAATCCAGGCAAGATTTTCACGTGCTGACCCGGCGGCGCGAGCTCG
CGCCGCACGCAGGAGACCTC

Downstream 100 bases:

>100_bases
GCGGTGCGCGCGGGTCGCGCCCCGCACCGGCGGCCGTGGTGCAGGGGTCTGCCGCGCCCGCGCGACGCGTTCGGGCGCCG
GCGCCGGCAGGCCGCATCCG

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MNAPVELSSAARAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMEVPI
VPRGAGTSLSGGALPIALGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NSGGVHCLKYGLTVHNVMRVRAVTIDGEVVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVRLIPKPQTAQLVMASFD
DVVKGGEAVAAIIASGIIPAGLEMMDRPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ
VSRNEHERLRFWSGRKNAFPAAGRISADYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNAND
PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPAGLLNPDKGIPTRARCAEYG
RQHVRGGLLPHPDLPRF

Sequences:

>Translated_497_residues
MNAPVELSSAARAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMEVPI
VPRGAGTSLSGGALPIALGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NSGGVHCLKYGLTVHNVMRVRAVTIDGEVVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVRLIPKPQTAQLVMASFD
DVVKGGEAVAAIIASGIIPAGLEMMDRPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ
VSRNEHERLRFWSGRKNAFPAAGRISADYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNAND
PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPAGLLNPDKGIPTRARCAEYG
RQHVRGGLLPHPDLPRF
>Mature_497_residues
MNAPVELSSAARAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMEVPI
VPRGAGTSLSGGALPIALGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NSGGVHCLKYGLTVHNVMRVRAVTIDGEVVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVRLIPKPQTAQLVMASFD
DVVKGGEAVAAIIASGIIPAGLEMMDRPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ
VSRNEHERLRFWSGRKNAFPAAGRISADYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNAND
PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPAGLLNPDKGIPTRARCAEYG
RQHVRGGLLPHPDLPRF

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=474, Percent_Identity=26.7932489451477, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI37595754, Length=497, Percent_Identity=26.3581488933602, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI119964728, Length=440, Percent_Identity=25.6818181818182, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI4501993, Length=235, Percent_Identity=26.8085106382979, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI1789351, Length=479, Percent_Identity=60.5427974947808, Blast_Score=603, Evalue=1e-174,
Organism=Escherichia coli, GI1787977, Length=524, Percent_Identity=23.8549618320611, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI48994907, Length=443, Percent_Identity=24.3792325056433, Blast_Score=89, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71992373, Length=429, Percent_Identity=26.1072261072261, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI71992381, Length=429, Percent_Identity=24.9417249417249, Blast_Score=149, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI71992392, Length=369, Percent_Identity=25.2032520325203, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17534361, Length=446, Percent_Identity=25.1121076233184, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17556096, Length=456, Percent_Identity=20.8333333333333, Blast_Score=75, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320027, Length=431, Percent_Identity=27.3781902552204, Blast_Score=166, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6320023, Length=463, Percent_Identity=28.9416846652268, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320764, Length=458, Percent_Identity=25.3275109170306, Blast_Score=144, Evalue=4e-35,
Organism=Drosophila melanogaster, GI18921117, Length=452, Percent_Identity=28.5398230088496, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24639277, Length=452, Percent_Identity=28.5398230088496, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24639275, Length=452, Percent_Identity=28.5398230088496, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24653753, Length=221, Percent_Identity=26.2443438914027, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 53797; Mature: 53797

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVELSSAARAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHCCEEEECC
ETESQVQRIVQICRRMEVPIVPRGAGTSLSGGALPIALGVVLSLARFTRIVEVDPYARTA
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEE
TVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRV
ECCCCHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCEECCCCCEEEEEECCHHHHEEEE
RAVTIDGEVVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVRLIPKPQTAQLVMASFD
EEEEECCCEEECCCEEECCCCHHHHHHHHCCCCCEEEEEEHHHEECCCCCHHHHHHHHHH
DVVKGGEAVAAIIASGIIPAGLEMMDRPATQAVEAFTHAGYDLDAKAILLCESDGTPEEV
HHHCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
AEEIVRMTAVLREHGATRIQVSRNEHERLRFWSGRKNAFPAAGRISADYYCMDGTVPRRA
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCHHH
IGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANDPDELHRAEQFGAEILECCVE
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
FGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPAGLLNPDKGIPTRARCAEYG
HCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
RQHVRGGLLPHPDLPRF
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPVELSSAARAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHCCEEEECC
ETESQVQRIVQICRRMEVPIVPRGAGTSLSGGALPIALGVVLSLARFTRIVEVDPYARTA
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEE
TVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRV
ECCCCHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCEECCCCCEEEEEECCHHHHEEEE
RAVTIDGEVVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVRLIPKPQTAQLVMASFD
EEEEECCCEEECCCEEECCCCHHHHHHHHCCCCCEEEEEEHHHEECCCCCHHHHHHHHHH
DVVKGGEAVAAIIASGIIPAGLEMMDRPATQAVEAFTHAGYDLDAKAILLCESDGTPEEV
HHHCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
AEEIVRMTAVLREHGATRIQVSRNEHERLRFWSGRKNAFPAAGRISADYYCMDGTVPRRA
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCHHH
IGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANDPDELHRAEQFGAEILECCVE
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
FGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPAGLLNPDKGIPTRARCAEYG
HCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
RQHVRGGLLPHPDLPRF
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]