| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021785
Identifier: 107021785
GI number: 107021785
Start: 238765
End: 240879
Strand: Reverse
Name: 107021785
Synonym: Bcen_0225
Alternate gene names: NA
Gene position: 240879-238765 (Counterclockwise)
Preceding gene: 107021786
Following gene: 107021784
Centisome position: 7.31
GC content: 69.5
Gene sequence:
>2115_bases ATGTTTCGTTCCCTGACGACCCTGATCAAGAAGTGGCGCGCGTCGCGCAATGCCGGTCACCAGCTCGATGCGCTGCTCGC CAACGCCGACGCCGACGCGTCGTACGCCGAGCGCAGCGAATGGCTGATCGAGCTCGCGCACTGGCTGCGCCGCAACGGTA CGGTGCAGGACACGCCGGCCGAGCGCGACGCCGACACGCGCACGTATCCGGCCCATGCGCGGCTGCGCTACCTGTTCCAC GTGCTCGACCGCAACCCCGCGTGGAAAGCGCACGCGGCGCGCATCCTGCGCGGCATCCTGCGCGAGTGCGACGGCATCTC GCTGCTGTGCGACGCCGGCATGCCGGTGCATTCGGGCTTCTTCGGCGCATTGTTCGAGCGGATCGATTCGTCGCTGATCC CGCCCGCGCCGAACCGCCGCGAGCTGTCGGCGCTGTTCACGCTGATGTTCCCCGCGCCCGAGGACGCGAAATGGATCGAC GCGCTGCCCGACGACCTGCTCGCGCGCCTCGCCGGCCTGATCTCGTTCGACGTCACCGAGGAAGAGCGCCACGAGCCCGG CTCGTTCTCGCGCGATCTGCTGGCCGCGCTGCACAACCTGACTTGCCAGATCAGCTCGACCGGCCTGTCGCAGACGGTGC GCAGCCGGCTGTCCGACGATGATGCGCGCAAGCCGCTCGAATCGCAGCCGTTCTACCGCCTCACTCGCGCGATGCTCGCG GTCGAGACCGCGCATGCGGCCGTCGAGGACGGCGGCGACCCGAGCAAGCTGCTGCACGAGGTGAACTACCTGCGCGTGCT GCTCGACGAATGCCGGATCGCCGTCGACGACGTGTTCGCGCACCTGTACCGCAACGGCGTGTCGGTCGACATCGTGTTTC AGGTCGAGCGGATGCGCATGCGCATCCTGCGCGCGGAAACGCTGCTGAACGCGTGGATGGCGCGCGACGACCTGCACGGA ATGGCGCACCTGACCGCCGAGCTGGTCGACGCGAACCAGAACAGCCAGAGCGTCGCGCACCTCGTGCGCAGCAACTTCTC GCTGTTCGCGCGCAAGCTCGTCGAGACCAACGCGGACACCGGCGAGCACTACATCTCGCGCGGCCGCACCGAGTACCTGA AGATGCTGCGGATGGCCGCGGGCGGCGGCCTCGTCACCGTCGTGACCGTGTGCGTGAAGTTCGCGATCACGGGCGCGCAC CTGCAGTCGATGCTCGAAGGGCTGCTCGCGGGCATCAACTACGCGGCCAGCTTCATGCTGATGCACTTCCTGCACTTCAC GCTCGCGACCAAGCAGCCCGCGATGACCGCGCCGACGCTCGCACGCGAGCTCGACGACACCGGCCACGAGGAAGGCGTGA AGACGTTCGTCGCGTCGGTGATCGCGCTGATCCGTACGCAGGCGGCCGCGATTTCCGGCAACGTGCTCGTCGTGCTGCCC GTGTGCCTGCTCGTGCAGCTGTTCGCGAGCAACGTGCTGCACGCGAACCTGATCTCGCCGGAGAAGGCGCACGCGACGCT GCATTCGTTCTCGCTGCTCGGCCCGACGCCGTTCTATGCCGCGCTCACCGGCGTGCTGCTGTGGGCGTCGAGCCTGCTCG CGGGCTGGGCCGACAACTGGTTCGTGCTGCACCGGGTCGGCGACGCGCTCACGTACAACCGCCGGCTGCGCCTGACGCTC GGCGCGACCGGTGCCGCGAAGCTCGCGCACTTCTGCCGCTCGAACGTCGCCGGCGTGGTCGCGAACGTCGGCCTCGGCCT GATGCTCGGCCTCGTGCCGGCGATCGTCACCGTGTTCATGTTCCCGTTCGAGGTGCGGCACGTGACGCTGTCGGCCGGCT CGATCGGGATCGCGCTCGGCGTGCTGGGCAAGGGTGCGCTCGGCACGCCCGAGCTGTGGTGGGCCGCCGCCGGCGTGCTC AGCATGGCGATCCTCAACGTGCTCGTGAGCTTCGCGCTCGCGTTCACGATGGCCGTGCGCTCGCGCAGCCTGCGCCCGAC CAAGGTACGCGCGCTCGTCGCGGCGATCGTCCGCACGGTGCTGTCGAACCCGCTCGCGCTGTTCTGGCCGGCGGGCAACC CCGCCGCGCGCGCCGGCCAGCCGGGCACGCACTGA
Upstream 100 bases:
>100_bases GTCCGGCACCGGCCCCGTCTCACCCGTTCTCACCGGCGTCGCGCCGTTTCCCCGGCCGGCATCCCGAACCCGCCCGTCCC GGGCTTTCGCTATTCCGTTT
Downstream 100 bases:
>100_bases CTTGCGGCGCGGTGGCGGCGCCTGGCCGGGCGCCCCTCGCCGCCCTCCCGGCACGCGCGAGCGGTCGTCGCCCCGACGCC GCCGCGCCGAAACGCCGGCC
Product: site-specific recombinase-like
Products: NA
Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MFRSLTTLIKKWRASRNAGHQLDALLANADADASYAERSEWLIELAHWLRRNGTVQDTPAERDADTRTYPAHARLRYLFH VLDRNPAWKAHAARILRGILRECDGISLLCDAGMPVHSGFFGALFERIDSSLIPPAPNRRELSALFTLMFPAPEDAKWID ALPDDLLARLAGLISFDVTEEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLESQPFYRLTRAMLA VETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFAHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLHG MAHLTAELVDANQNSQSVAHLVRSNFSLFARKLVETNADTGEHYISRGRTEYLKMLRMAAGGGLVTVVTVCVKFAITGAH LQSMLEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKTFVASVIALIRTQAAAISGNVLVVLP VCLLVQLFASNVLHANLISPEKAHATLHSFSLLGPTPFYAALTGVLLWASSLLAGWADNWFVLHRVGDALTYNRRLRLTL GATGAAKLAHFCRSNVAGVVANVGLGLMLGLVPAIVTVFMFPFEVRHVTLSAGSIGIALGVLGKGALGTPELWWAAAGVL SMAILNVLVSFALAFTMAVRSRSLRPTKVRALVAAIVRTVLSNPLALFWPAGNPAARAGQPGTH
Sequences:
>Translated_704_residues MFRSLTTLIKKWRASRNAGHQLDALLANADADASYAERSEWLIELAHWLRRNGTVQDTPAERDADTRTYPAHARLRYLFH VLDRNPAWKAHAARILRGILRECDGISLLCDAGMPVHSGFFGALFERIDSSLIPPAPNRRELSALFTLMFPAPEDAKWID ALPDDLLARLAGLISFDVTEEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLESQPFYRLTRAMLA VETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFAHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLHG MAHLTAELVDANQNSQSVAHLVRSNFSLFARKLVETNADTGEHYISRGRTEYLKMLRMAAGGGLVTVVTVCVKFAITGAH LQSMLEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKTFVASVIALIRTQAAAISGNVLVVLP VCLLVQLFASNVLHANLISPEKAHATLHSFSLLGPTPFYAALTGVLLWASSLLAGWADNWFVLHRVGDALTYNRRLRLTL GATGAAKLAHFCRSNVAGVVANVGLGLMLGLVPAIVTVFMFPFEVRHVTLSAGSIGIALGVLGKGALGTPELWWAAAGVL SMAILNVLVSFALAFTMAVRSRSLRPTKVRALVAAIVRTVLSNPLALFWPAGNPAARAGQPGTH >Mature_704_residues MFRSLTTLIKKWRASRNAGHQLDALLANADADASYAERSEWLIELAHWLRRNGTVQDTPAERDADTRTYPAHARLRYLFH VLDRNPAWKAHAARILRGILRECDGISLLCDAGMPVHSGFFGALFERIDSSLIPPAPNRRELSALFTLMFPAPEDAKWID ALPDDLLARLAGLISFDVTEEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLESQPFYRLTRAMLA VETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFAHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLHG MAHLTAELVDANQNSQSVAHLVRSNFSLFARKLVETNADTGEHYISRGRTEYLKMLRMAAGGGLVTVVTVCVKFAITGAH LQSMLEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKTFVASVIALIRTQAAAISGNVLVVLP VCLLVQLFASNVLHANLISPEKAHATLHSFSLLGPTPFYAALTGVLLWASSLLAGWADNWFVLHRVGDALTYNRRLRLTL GATGAAKLAHFCRSNVAGVVANVGLGLMLGLVPAIVTVFMFPFEVRHVTLSAGSIGIALGVLGKGALGTPELWWAAAGVL SMAILNVLVSFALAFTMAVRSRSLRPTKVRALVAAIVRTVLSNPLALFWPAGNPAARAGQPGTH
Specific function: Unknown
COG id: COG4389
COG function: function code L; Site-specific recombinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76844; Mature: 76844
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSLTTLIKKWRASRNAGHQLDALLANADADASYAERSEWLIELAHWLRRNGTVQDTPA CCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC ERDADTRTYPAHARLRYLFHVLDRNPAWKAHAARILRGILRECDGISLLCDAGMPVHSGF CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH FGALFERIDSSLIPPAPNRRELSALFTLMFPAPEDAKWIDALPDDLLARLAGLISFDVTE HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCH EERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLESQPFYRLTRAMLA HHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHH VETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFAHLYRNGVSVDIVFQVERMRM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH RILRAETLLNAWMARDDLHGMAHLTAELVDANQNSQSVAHLVRSNFSLFARKLVETNADT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GEHYISRGRTEYLKMLRMAAGGGLVTVVTVCVKFAITGAHLQSMLEGLLAGINYAASFML HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKTFVASVIALIRTQAAAISGNVLVVLP HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VCLLVQLFASNVLHANLISPEKAHATLHSFSLLGPTPFYAALTGVLLWASSLLAGWADNW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCE FVLHRVGDALTYNRRLRLTLGATGAAKLAHFCRSNVAGVVANVGLGLMLGLVPAIVTVFM EEEEHHCCHHEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPFEVRHVTLSAGSIGIALGVLGKGALGTPELWWAAAGVLSMAILNVLVSFALAFTMAVR HHHHEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRSLRPTKVRALVAAIVRTVLSNPLALFWPAGNPAARAGQPGTH HCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MFRSLTTLIKKWRASRNAGHQLDALLANADADASYAERSEWLIELAHWLRRNGTVQDTPA CCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC ERDADTRTYPAHARLRYLFHVLDRNPAWKAHAARILRGILRECDGISLLCDAGMPVHSGF CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH FGALFERIDSSLIPPAPNRRELSALFTLMFPAPEDAKWIDALPDDLLARLAGLISFDVTE HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCH EERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLESQPFYRLTRAMLA HHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHH VETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFAHLYRNGVSVDIVFQVERMRM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH RILRAETLLNAWMARDDLHGMAHLTAELVDANQNSQSVAHLVRSNFSLFARKLVETNADT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GEHYISRGRTEYLKMLRMAAGGGLVTVVTVCVKFAITGAHLQSMLEGLLAGINYAASFML HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKTFVASVIALIRTQAAAISGNVLVVLP HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VCLLVQLFASNVLHANLISPEKAHATLHSFSLLGPTPFYAALTGVLLWASSLLAGWADNW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCE FVLHRVGDALTYNRRLRLTLGATGAAKLAHFCRSNVAGVVANVGLGLMLGLVPAIVTVFM EEEEHHCCHHEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPFEVRHVTLSAGSIGIALGVLGKGALGTPELWWAAAGVLSMAILNVLVSFALAFTMAVR HHHHEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRSLRPTKVRALVAAIVRTVLSNPLALFWPAGNPAARAGQPGTH HCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA