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The map label for this gene is ruvC [H]

Identifier: 107021767

GI number: 107021767

Start: 219757

End: 220299

Strand: Reverse

Name: ruvC [H]

Synonym: Bcen_0207

Alternate gene names: 107021767

Gene position: 220299-219757 (Counterclockwise)

Preceding gene: 107021768

Following gene: 107021766

Centisome position: 6.69

GC content: 71.64

Gene sequence:

>543_bases
ATGCGAATTCTCGGCATCGACCCCGGCCTGCGCGTCACCGGCTTCGGCGTCATCGACGTCAGCGGCCACCGGCTCGCCTA
TGTCACGAGCGGCGTGATCCGCACGCCGACGGCCGATCTGGCCACCCGGCTCGGCACGATCTTCCAGGGCGTCTCGACGA
TCGTGCGCGAACACGCGCCCGACCAGGCCGCGATCGAAAAGGTGTTCGTCAACGTGAACCCGCAGTCGACGCTGCTGCTC
GGCCAGGCGCGCGGCGCCGCGATCTGCGGCCTCGTCGCGGGCGGGCTGCCGGTCGCCGAATACACGGCGCTGCAGCTCAA
GCAGGCCGTGGTCGGCTACGGCCGCGCGACCAAGACGCAGATGCAGGAAATGGTCACGCGGCTGCTCAACCTGTCCGGCC
AGCCGGGCTCCGACGCAGCCGACGCGCTCGGCATGGCGATCTGCCACGCGCACGGCGGCAACACGCTCAGCACGCTGGGC
GGCCTGGCGCCGGCGCTCGCGCAGAAAGGGCTGCGCGTGCGGCGCGGCAGGTTGGTCGGCTGA

Upstream 100 bases:

>100_bases
GCCGGGTTTTTTATTGCGCGGCGCCTTCGCGCGCGAACGGGCGACCGGCTTGCCGCACCATTCGTTGTAGTATCGCTGCA
TCACGCCACTCTCCTCACTC

Downstream 100 bases:

>100_bases
CGCTGCTGCTGCGCACGGGGCCCGTGGCCCGACGCGTCGGCTCCACTGCGTGGGCCGCCTGGACCGGGTTGGCCGCTTGC
CCGCTTTACCCTCGCCCGAC

Product: Holliday junction resolvase

Products: NA

Alternate protein names: Holliday junction nuclease ruvC; Holliday junction resolvase ruvC [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRILGIDPGLRVTGFGVIDVSGHRLAYVTSGVIRTPTADLATRLGTIFQGVSTIVREHAPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVAGGLPVAEYTALQLKQAVVGYGRATKTQMQEMVTRLLNLSGQPGSDAADALGMAICHAHGGNTLSTLG
GLAPALAQKGLRVRRGRLVG

Sequences:

>Translated_180_residues
MRILGIDPGLRVTGFGVIDVSGHRLAYVTSGVIRTPTADLATRLGTIFQGVSTIVREHAPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVAGGLPVAEYTALQLKQAVVGYGRATKTQMQEMVTRLLNLSGQPGSDAADALGMAICHAHGGNTLSTLG
GLAPALAQKGLRVRRGRLVG
>Mature_180_residues
MRILGIDPGLRVTGFGVIDVSGHRLAYVTSGVIRTPTADLATRLGTIFQGVSTIVREHAPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVAGGLPVAEYTALQLKQAVVGYGRATKTQMQEMVTRLLNLSGQPGSDAADALGMAICHAHGGNTLSTLG
GLAPALAQKGLRVRRGRLVG

Specific function: Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leav

COG id: COG0817

COG function: function code L; Holliday junction resolvasome, endonuclease subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvC family [H]

Homologues:

Organism=Escherichia coli, GI1788170, Length=176, Percent_Identity=50, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR020563
- InterPro:   IPR002176 [H]

Pfam domain/function: PF02075 RuvC [H]

EC number: =3.1.22.4 [H]

Molecular weight: Translated: 18605; Mature: 18605

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILGIDPGLRVTGFGVIDVSGHRLAYVTSGVIRTPTADLATRLGTIFQGVSTIVREHAP
CEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DQAAIEKVFVNVNPQSTLLLGQARGAAICGLVAGGLPVAEYTALQLKQAVVGYGRATKTQ
CHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
MQEMVTRLLNLSGQPGSDAADALGMAICHAHGGNTLSTLGGLAPALAQKGLRVRRGRLVG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure
MRILGIDPGLRVTGFGVIDVSGHRLAYVTSGVIRTPTADLATRLGTIFQGVSTIVREHAP
CEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DQAAIEKVFVNVNPQSTLLLGQARGAAICGLVAGGLPVAEYTALQLKQAVVGYGRATKTQ
CHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
MQEMVTRLLNLSGQPGSDAADALGMAICHAHGGNTLSTLGGLAPALAQKGLRVRRGRLVG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA