| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021741
Identifier: 107021741
GI number: 107021741
Start: 189232
End: 189879
Strand: Reverse
Name: 107021741
Synonym: Bcen_0181
Alternate gene names: NA
Gene position: 189879-189232 (Counterclockwise)
Preceding gene: 107021743
Following gene: 107021736
Centisome position: 5.76
GC content: 71.14
Gene sequence:
>648_bases ATGAAAGACAAACCCGCCCAGGGGCCGCGCGGCCTCGACAAGGACGCGATCGTCGCGGCCGCGCTCGCGCTGCTCGAAGA CGTCGGCGAAGCCGCGTTCAGCGTGCGCAAGCTCGCGCAATCGGTCGGCTGCGACCCGATGAGCGTGCTGTATCACTTCA AGTCCAAGGAAGGCCTGAGCCGTGCGATCGCGAATGCGCTGTCGCGCTCGCTCGTGCCGGTCGATCCTTCACTGCCGTGG CGCGAACGGCTGCGCGACCTCGCGCGCCAATACCGCACGCTCGCGCTGCGCTACCCCGCCGCATTCGCGCTGCTGCAGCG GCACATGAGCACGGGGCCGGCCGATCTCGCGCACATCGAGGCCGTGCATCGCGCGCTGACCGACGCCGGCATCCCGCGCG CGGCGCTGCCGTCGGTATGCGTCGGCTGGTACGCGAGCGTAATCGGGCTCGCCGCCGCCGAAGCGGGCGGCCTCACGCGC GCCGCGAACGACGTCGAGCTCGCGGAAATGCACGCGCTGGCCGACGCCGCGCATCCGCTCGTCAAGTCGGCCGCCCCGCT CTATGCGCAGCTCGATCCGGCCGTCGTGCACGACACGATGCTCGACGTGCTGCTCGACGGCATCGCGCAACGCGCACGCA CGGCCTGA
Upstream 100 bases:
>100_bases GGGACACCCAATTTCTACACCGCAGAAATAATTCTACAGTGTAGAATAAGCTTTCGTCAAGTTTACAGCCGGTACGGTGC CGGCCTGCCAGCCCGCCTCG
Downstream 100 bases:
>100_bases CCGGCTTGCGCATCGCCAACGAAAAAGGCGCCCGAAGGCGCCTTTTTCATGACGATGACCGCGAACCGCGCTCAGTGCTG CTGCGCGAGGCCGATCTTCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcription Regulator; Transcriptional Regulator
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLSRAIANALSRSLVPVDPSLPW RERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIEAVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTR AANDVELAEMHALADAAHPLVKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA
Sequences:
>Translated_215_residues MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLSRAIANALSRSLVPVDPSLPW RERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIEAVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTR AANDVELAEMHALADAAHPLVKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA >Mature_215_residues MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLSRAIANALSRSLVPVDPSLPW RERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIEAVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTR AANDVELAEMHALADAAHPLVKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22825; Mature: 22825
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RAIANALSRSLVPVDPSLPWRERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTRAANDVELAEMHALADAAHPL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH VKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RAIANALSRSLVPVDPSLPWRERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTRAANDVELAEMHALADAAHPL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH VKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA