Click here to switch to the map view.

The map label for this gene is yacF [C]

Identifier: 107021652

GI number: 107021652

Start: 96793

End: 97548

Strand: Reverse

Name: yacF [C]

Synonym: Bcen_0092

Alternate gene names: 107021652

Gene position: 97548-96793 (Counterclockwise)

Preceding gene: 107021653

Following gene: 107021651

Centisome position: 2.96

GC content: 63.36

Gene sequence:

>756_bases
TTGATTCTTTACGAGTATCCGTTCAACGAGCGAATTCGCACGCTGTTGCGTCTCGAAGATCTGTTCGAGCGCTTCGCGTT
CTTTTTGGCTCAGGAGGACCCGCGTGAGCACCACGTCGCGCTGACGACGCTGTTCGAAATCGCCGAGGTAACGGGCCGCG
CGGACCTGAAATCGGATCTGATGAAGGAGCTCGAACGTCAACGCCAGACGCTCGCCCCCTTTCGCGGCAATCCGGGCATC
GAGCAGAATGCGCTCGAGGCCGTGCTCGGCGAAATCGAGCAGACGCTCGCGAATCTCGCGCAGATGCAGGGCAAGACCGG
CCAGCATCTCGTCGACAACGAGTGGCTCGCCAGCATCCGCAGCCGCGCGGTGATTCCGGGCGGCACGTGCAAGTTCGACC
TGCCGTCGTACTACGCGTGGCAGCAATGGCCCGCCGAGCAGCGGCGCCAGGACATCGCGAAGTGGATGCTGCCGATGCTG
CCGTTGCGCGACGCCGCGGCGATCGTGCTGCGGCTCGCGCGCGAATCGGGTCAGGCGTCGAAGGTCATGGCGATGCAGGG
CAGCTACCAGCAGATGCTGTCCGGGCGCAGCTACCAGTTGATGCAGGTGCGGGTGCCGCCGGAGCTGCGCGTGATTCCCG
AAGCGAGCGCCAACAAATACATGTTGTGGGTACGGTTCACCATGCAGGACGGCGACGTGCGGCCGCGTGCGGTGGACATC
GACGTACCGTTCCATCTGACCCTGTGTAATCTGTAA

Upstream 100 bases:

>100_bases
GCAATCGTGATGGTGTACGAAATTGGCGCGTTGCTAGGGTAGAGAGGGGGCATTAGAATGTCCTTCATTGTTTCAATCCC
TACCCAAGAGGCGAGCGCGC

Downstream 100 bases:

>100_bases
CGGCCGCGTGCCGGTTCAACGCTTTCGTATGACTACCGTTGTGAAATGTCCGTCGTGCGGCGCAGAAGTGCGCTGGACGC
CTGAAAACAAGTTCCGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MILYEYPFNERIRTLLRLEDLFERFAFFLAQEDPREHHVALTTLFEIAEVTGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEIEQTLANLAQMQGKTGQHLVDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRQDIAKWMLPML
PLRDAAAIVLRLARESGQASKVMAMQGSYQQMLSGRSYQLMQVRVPPELRVIPEASANKYMLWVRFTMQDGDVRPRAVDI
DVPFHLTLCNL

Sequences:

>Translated_251_residues
MILYEYPFNERIRTLLRLEDLFERFAFFLAQEDPREHHVALTTLFEIAEVTGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEIEQTLANLAQMQGKTGQHLVDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRQDIAKWMLPML
PLRDAAAIVLRLARESGQASKVMAMQGSYQQMLSGRSYQLMQVRVPPELRVIPEASANKYMLWVRFTMQDGDVRPRAVDI
DVPFHLTLCNL
>Mature_251_residues
MILYEYPFNERIRTLLRLEDLFERFAFFLAQEDPREHHVALTTLFEIAEVTGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEIEQTLANLAQMQGKTGQHLVDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRQDIAKWMLPML
PLRDAAAIVLRLARESGQASKVMAMQGSYQQMLSGRSYQLMQVRVPPELRVIPEASANKYMLWVRFTMQDGDVRPRAVDI
DVPFHLTLCNL

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family

Homologues:

Organism=Escherichia coli, GI1786291, Length=251, Percent_Identity=30.2788844621514, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y092_BURCA (Q1BZE9)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_619979.1
- ProteinModelPortal:   Q1BZE9
- SMR:   Q1BZE9
- STRING:   Q1BZE9
- GeneID:   4091853
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_0092
- eggNOG:   COG4582
- HOGENOM:   HBG432810
- OMA:   CYPTISG
- ProtClustDB:   PRK05287
- BioCyc:   BCEN331271:BCEN_0092-MONOMER
- HAMAP:   MF_01092
- InterPro:   IPR009777

Pfam domain/function: PF07072 DUF1342

EC number: NA

Molecular weight: Translated: 28935; Mature: 28935

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYEYPFNERIRTLLRLEDLFERFAFFLAQEDPREHHVALTTLFEIAEVTGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
MKELERQRQTLAPFRGNPGIEQNALEAVLGEIEQTLANLAQMQGKTGQHLVDNEWLASIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SRAVIPGGTCKFDLPSYYAWQQWPAEQRRQDIAKWMLPMLPLRDAAAIVLRLARESGQAS
HCCCCCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
KVMAMQGSYQQMLSGRSYQLMQVRVPPELRVIPEASANKYMLWVRFTMQDGDVRPRAVDI
HHHHHCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCEEEEEEEEEECCCCCCCEEEEE
DVPFHLTLCNL
CCCEEEEEECC
>Mature Secondary Structure
MILYEYPFNERIRTLLRLEDLFERFAFFLAQEDPREHHVALTTLFEIAEVTGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
MKELERQRQTLAPFRGNPGIEQNALEAVLGEIEQTLANLAQMQGKTGQHLVDNEWLASIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SRAVIPGGTCKFDLPSYYAWQQWPAEQRRQDIAKWMLPMLPLRDAAAIVLRLARESGQAS
HCCCCCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
KVMAMQGSYQQMLSGRSYQLMQVRVPPELRVIPEASANKYMLWVRFTMQDGDVRPRAVDI
HHHHHCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCEEEEEEEEEECCCCCCCEEEEE
DVPFHLTLCNL
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA