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The map label for this gene is omp32 [H]

Identifier: 107021627

GI number: 107021627

Start: 67213

End: 68364

Strand: Reverse

Name: omp32 [H]

Synonym: Bcen_0066

Alternate gene names: 107021627

Gene position: 68364-67213 (Counterclockwise)

Preceding gene: 107021646

Following gene: 107021621

Centisome position: 2.08

GC content: 63.11

Gene sequence:

>1152_bases
ATGAAAAAGTCGCTTCTCGCGCTCGTCGCGCTGGGCGCGTTCGCTGGCGCTGCCCATGCGCAAAGCAGCGTGACGCTTTA
CGGCATCATCGATGAAGGCTTCCTCTTCAACAACAACGCAGGCGGCAAGCACTTGTACGGCCTGGCGAGCGGCGTGATGC
AGGGTAGCCGCTTCGGCCTGCGCGGCACCGAAGACCTCGGTGGCGGCCTGAAGGCGATCTTCACCCTCGAAAACGGTTTC
GACGTGAACAGCGGCAGGCTCGGTCAGGGCGGCCTGATGTTCGGTCGTCAGGCTTACGTCGGCCTGTCGAGCCAGTACGG
CACGGTCACGCTGGGTCGTCAGTACGACTCCGTCGTCGACTTCGTCGGCCCGCTCGAGGCAGGCGACCAGTGGGGCGGCT
ACATCGCCGCTCACCCGGGCGACCTCGACAACTTCAACAACGCGTATCGCGTGAACAACGCGGTCAAGTTCACGAGCGCG
AACTACGGCGGCCTCACGTTCGGCGGCTTGTACAGCTTCGGCGGCCAGGCAGGCCAGTTCTCGAAGAACCAGGTCTGGTC
GCTCGGCGCAGGCTACACCAACGGCCCGCTCGTCCTCGGCGTCGGTTACTTGAACGCACGTACGCCGAACCAGTTCGGCG
GCATGTTCAACAACGGGTCGGCATCGTCGTCGGTTTCGTCGCCGGTCTACGGCGCGTACGCGAACAATGCGAACACGTAC
CAGGTCATCGGTGCAGGCGGCGCTTACACGTTCGGTGCAGCGACGATCGGCGCGACGTACTCGAACACGAAGTTCAAGGG
CTTCTCGGCAGGCCCGTTCGTGAACCAGACCGCGACGTTCAACAACGGCGAAATCAACTTCAAGTACCAGTTGACGCCGG
CGTTGATCCTCGGCGCGGCGTACGACTACACGCAAGGCAGCAAGATCGACGGCAACTCGGCAGCCAAGTACCACCAGGGC
TCGCTGGGCGTCGACTACTTCCTGTCGAAGCGTACCGACGTCTACGCGATCGGCGTGTACCAGCACGCATCGGGCAACGT
GCTCGATTCGAACGGCAACGTCCTGAAGGCAACGGCAGCGATCAACGGTCTGGCCGGGTCGAGCACGAGCAACCAGGTCG
CGGCACGCGTCGGTATCCGTCACAAGTTCTAA

Upstream 100 bases:

>100_bases
CTACATTACGTGCGACTTCTTGCGAAGTTGATGGGGCCCGTCGCCAGAACATAACTATCCGCCCCGCCAAAAAAATTCAG
TGATTCTTGGAGATCCGTTA

Downstream 100 bases:

>100_bases
TCAGCTTGCCTGACAAGCCGCAGCATATTGAAGGCGCCTTCGGGCGCCTTTTTCTTTTGTGGTGAGGCGGTGACGGTGAT
GGATCAGCGGGTCGGTGGAT

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGFLFNNNAGGKHLYGLASGVMQGSRFGLRGTEDLGGGLKAIFTLENGF
DVNSGRLGQGGLMFGRQAYVGLSSQYGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSA
NYGGLTFGGLYSFGGQAGQFSKNQVWSLGAGYTNGPLVLGVGYLNARTPNQFGGMFNNGSASSSVSSPVYGAYANNANTY
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQTATFNNGEINFKYQLTPALILGAAYDYTQGSKIDGNSAAKYHQG
SLGVDYFLSKRTDVYAIGVYQHASGNVLDSNGNVLKATAAINGLAGSSTSNQVAARVGIRHKF

Sequences:

>Translated_383_residues
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGFLFNNNAGGKHLYGLASGVMQGSRFGLRGTEDLGGGLKAIFTLENGF
DVNSGRLGQGGLMFGRQAYVGLSSQYGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSA
NYGGLTFGGLYSFGGQAGQFSKNQVWSLGAGYTNGPLVLGVGYLNARTPNQFGGMFNNGSASSSVSSPVYGAYANNANTY
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQTATFNNGEINFKYQLTPALILGAAYDYTQGSKIDGNSAAKYHQG
SLGVDYFLSKRTDVYAIGVYQHASGNVLDSNGNVLKATAAINGLAGSSTSNQVAARVGIRHKF
>Mature_383_residues
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGFLFNNNAGGKHLYGLASGVMQGSRFGLRGTEDLGGGLKAIFTLENGF
DVNSGRLGQGGLMFGRQAYVGLSSQYGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSA
NYGGLTFGGLYSFGGQAGQFSKNQVWSLGAGYTNGPLVLGVGYLNARTPNQFGGMFNNGSASSSVSSPVYGAYANNANTY
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQTATFNNGEINFKYQLTPALILGAAYDYTQGSKIDGNSAAKYHQG
SLGVDYFLSKRTDVYAIGVYQHASGNVLDSNGNVLKATAAINGLAGSSTSNQVAARVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39813; Mature: 39813

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGFLFNNNAGGKHLYGLASGVMQGSRFGL
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCC
RGTEDLGGGLKAIFTLENGFDVNSGRLGQGGLMFGRQAYVGLSSQYGTVTLGRQYDSVVD
CCCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCEEEECCCHHHHHH
FVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGLTFGGLYSFGGQAGQF
HHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEECHHHHCCCCCCCC
SKNQVWSLGAGYTNGPLVLGVGYLNARTPNQFGGMFNNGSASSSVSSPVYGAYANNANTY
CCCCEEEECCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCEE
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQTATFNNGEINFKYQLTPALILGAA
EEEECCCCEEECCEEECCEECCCEECCEECCCCCCCEEECCCCEEEEEEEECCEEEEECC
YDYTQGSKIDGNSAAKYHQGSLGVDYFLSKRTDVYAIGVYQHASGNVLDSNGNVLKATAA
CCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEE
INGLAGSSTSNQVAARVGIRHKF
ECCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGFLFNNNAGGKHLYGLASGVMQGSRFGL
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCC
RGTEDLGGGLKAIFTLENGFDVNSGRLGQGGLMFGRQAYVGLSSQYGTVTLGRQYDSVVD
CCCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCEEEECCCHHHHHH
FVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGLTFGGLYSFGGQAGQF
HHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEECHHHHCCCCCCCC
SKNQVWSLGAGYTNGPLVLGVGYLNARTPNQFGGMFNNGSASSSVSSPVYGAYANNANTY
CCCCEEEECCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCEE
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQTATFNNGEINFKYQLTPALILGAA
EEEECCCCEEECCEEECCEECCCEECCEECCCCCCCEEECCCCEEEEEEEECCEEEEECC
YDYTQGSKIDGNSAAKYHQGSLGVDYFLSKRTDVYAIGVYQHASGNVLDSNGNVLKATAA
CCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEE
INGLAGSSTSNQVAARVGIRHKF
ECCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]