| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021573
Identifier: 107021573
GI number: 107021573
Start: 13431
End: 13841
Strand: Reverse
Name: 107021573
Synonym: Bcen_0011
Alternate gene names: NA
Gene position: 13841-13431 (Counterclockwise)
Preceding gene: 107021582
Following gene: 107021569
Centisome position: 0.42
GC content: 71.78
Gene sequence:
>411_bases ATGAACGCGCTCTCGATCCGGATCCTTTCCCTCGCCCTCTTCGCGGGTTTGTGCGCGACGGCCACCTACTGGGTCGTCAC GCTGTCCGCTCGCGAAGCGCCGCTGCCCGCCGCCGCCGCGCGGCTGCCGATCCGCACCGAGGACGCCGCCGCGCTCTTCG GCGGTCAGCTCGACAAGAATCCCGTCCAGGACATCCACCTGTTCGGCATTCTCGCGCTCGACCACGGCGGCGCCGCGATC GTCAGCGTCGGCGGCGAACCGCCGCGCGCCGTGTCGCTCGGCGCGGACGTCACGTCCGGCGCGAAGCTCGCCGAAGTGCG CCCGCGCTCGATCATCGTCGACCGCAACGGCGCCCGCGCCGAAATCCAGCTCCCGGCGAACACGCCGTCCCCCGCGATCT ACATGCGCTGA
Upstream 100 bases:
>100_bases ACCTTCCGGACCGGCGGGCGCGGAGCACGCATTGTAAGGCGCGCATCGCCGAGGGCTTTCACCCAACGCAAATTTCATAT ACATCCGTACAATAGCGCGC
Downstream 100 bases:
>100_bases ACGGCGGCGGCCCGGCAAGCGGAATCGGGCCGCTCCGTCACTGCACCATGTTGTTCAGCTCGATGATCGGCAGCATCACG GCCAGCACGATCACGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: General Secretion Pathway Protein C; General Secretion Pathway Related Transmembrane Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAI VSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR
Sequences:
>Translated_136_residues MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAI VSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR >Mature_136_residues MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAI VSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14121; Mature: 14121
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKN CCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHCCCCCCCCCHHHHCCCCCCC PVQDIHLFGILALDHGGAAIVSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARA CCCEEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCEE EIQLPANTPSPAIYMR EEEECCCCCCCEEEEC >Mature Secondary Structure MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKN CCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHCCCCCCCCCHHHHCCCCCCC PVQDIHLFGILALDHGGAAIVSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARA CCCEEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCEE EIQLPANTPSPAIYMR EEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA