Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107021573

Identifier: 107021573

GI number: 107021573

Start: 13431

End: 13841

Strand: Reverse

Name: 107021573

Synonym: Bcen_0011

Alternate gene names: NA

Gene position: 13841-13431 (Counterclockwise)

Preceding gene: 107021582

Following gene: 107021569

Centisome position: 0.42

GC content: 71.78

Gene sequence:

>411_bases
ATGAACGCGCTCTCGATCCGGATCCTTTCCCTCGCCCTCTTCGCGGGTTTGTGCGCGACGGCCACCTACTGGGTCGTCAC
GCTGTCCGCTCGCGAAGCGCCGCTGCCCGCCGCCGCCGCGCGGCTGCCGATCCGCACCGAGGACGCCGCCGCGCTCTTCG
GCGGTCAGCTCGACAAGAATCCCGTCCAGGACATCCACCTGTTCGGCATTCTCGCGCTCGACCACGGCGGCGCCGCGATC
GTCAGCGTCGGCGGCGAACCGCCGCGCGCCGTGTCGCTCGGCGCGGACGTCACGTCCGGCGCGAAGCTCGCCGAAGTGCG
CCCGCGCTCGATCATCGTCGACCGCAACGGCGCCCGCGCCGAAATCCAGCTCCCGGCGAACACGCCGTCCCCCGCGATCT
ACATGCGCTGA

Upstream 100 bases:

>100_bases
ACCTTCCGGACCGGCGGGCGCGGAGCACGCATTGTAAGGCGCGCATCGCCGAGGGCTTTCACCCAACGCAAATTTCATAT
ACATCCGTACAATAGCGCGC

Downstream 100 bases:

>100_bases
ACGGCGGCGGCCCGGCAAGCGGAATCGGGCCGCTCCGTCACTGCACCATGTTGTTCAGCTCGATGATCGGCAGCATCACG
GCCAGCACGATCACGAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: General Secretion Pathway Protein C; General Secretion Pathway Related Transmembrane Protein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAI
VSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR

Sequences:

>Translated_136_residues
MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAI
VSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR
>Mature_136_residues
MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAI
VSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14121; Mature: 14121

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKN
CCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHCCCCCCCCCHHHHCCCCCCC
PVQDIHLFGILALDHGGAAIVSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARA
CCCEEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCEE
EIQLPANTPSPAIYMR
EEEECCCCCCCEEEEC
>Mature Secondary Structure
MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKN
CCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHCCCCCCCCCHHHHCCCCCCC
PVQDIHLFGILALDHGGAAIVSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARA
CCCEEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCEE
EIQLPANTPSPAIYMR
EEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA