| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
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The map label for this gene is gph [C]
Identifier: 104779361
GI number: 104779361
Start: 46092
End: 46742
Strand: Reverse
Name: gph [C]
Synonym: PSEEN0048
Alternate gene names: 104779361
Gene position: 46742-46092 (Counterclockwise)
Preceding gene: 104779362
Following gene: 104779359
Centisome position: 0.79
GC content: 62.52
Gene sequence:
>651_bases ATGCATCAGCAGAACATCCTCTTCGACCTCGACGGCACCCTGACCGACCCGCGCTCAGGCATCACCCGTTCGATCCAGTA CGCCCTGGCCAAGCTGGGCATCGACGAGCCCGACCTGGCCCGCCTCGAGCACTTCATCGGTCCACCCCTGTTGCAAGCCT TCATGCAGTTCTACGGTTTCGACGAGGCCAAGGCGTGGCAGGCGGTGAACTTCTACCGTGAGCGCTTCAAGGTGACCGGG CTGTACGAAAACCTGGTATTCGACGGTGTGCCTGAGCTGCTGCAAGCCCTCAATGCCCAAGGCCGCACCCTGTACATCGC CACCTCCAAGCCGTGGGAATATGCCCGTGAAATCGCCCGGCACTTCGCCTTCGCCCAGCACTTCAAGGTGATCTACGGCA GCGAACTGGACGGTACCCGCACCAACAAGGTCGAGCTGATTCGCCATCTGCTGGATGAAGAAGGGCTGGACCCGGCGCAG ACCCTGATGATCGGTGACCGCAAGCACGACCTGATCGGCGCCCGCAGCAATGGGCTTCAGGCGGTAGCGGTGGGGTACGG GTTCGGCAGTCGGGAGGAGTTGGTGGCCGAGGCGCCAGCGTTCCACTTCGAGACACTGGCCGAGTTGCACCAGGCGTTCA TGCACGGTTGA
Upstream 100 bases:
>100_bases TCAAGGACCAACACCTGGCCGAAGGCTACGACCAACCGGAATGACCCATTCGCGGGCAAGCCCGCGAAGCAGTCGACGAT AGATTCAAGTGGACCCCGAC
Downstream 100 bases:
>100_bases GCGTGTCTAGTCAGCACCTGTAGGAGCCGGCTTGCCGGCGATGGGCCGCAACGCGGCCCCAGGTTGCTGCAATCGCGTCA ACGCCGCCTTGCGTTCTTCG
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGFDEAKAWQAVNFYRERFKVTG LYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIARHFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQ TLMIGDRKHDLIGARSNGLQAVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG
Sequences:
>Translated_216_residues MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGFDEAKAWQAVNFYRERFKVTG LYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIARHFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQ TLMIGDRKHDLIGARSNGLQAVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG >Mature_216_residues MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGFDEAKAWQAVNFYRERFKVTG LYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIARHFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQ TLMIGDRKHDLIGARSNGLQAVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG
Specific function: Specifically dephosphorylates nucleoside 5'- monophosphates to nucleosides and inorganic phosphate. Displays high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 24440; Mature: 24440
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGF CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCC DEAKAWQAVNFYRERFKVTGLYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIAR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH HFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQTLMIGDRKHDLIGARSNGLQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHEECCCCHHHCCCCCCCCE AVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG EEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGF CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCC DEAKAWQAVNFYRERFKVTGLYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIAR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH HFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQTLMIGDRKHDLIGARSNGLQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHEECCCCHHHCCCCCCCCE AVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG EEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]