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The map label for this gene is xyoA [H]

Identifier: 103488649

GI number: 103488649

Start: 3330613

End: 3331866

Strand: Direct

Name: xyoA [H]

Synonym: Sala_3174

Alternate gene names: 103488649

Gene position: 3330613-3331866 (Clockwise)

Preceding gene: 103488648

Following gene: 103488650

Centisome position: 99.56

GC content: 66.67

Gene sequence:

>1254_bases
ATGAGCTGGAGCAACTGGTCGGGCAGCGTCGCCGCGCGCGCCGCGATAGCGCGCCCGCAAAGCGAGGACGAACTCGCGGC
GTTGATTCGCGGCGCGCACCGGCTGCGCGTCGCGGGGGCGGGACACAGCTTCATGCCGCTCTGCGAATCGGACGAGCTGA
TCGTCAGCCTCGACGCGATGCCGGGCGAGATCCGCGTCGCACCCGATCGCCGCACCGCGCGCATCCCCGCGGGCTGGAGC
ATCCGGCGGCTGACCGCGGCGCTCTGGGACCATGGCCTCGCGCTCGCCAATCAGGGCGACGTCAATCCGCAGTCGCTCGC
GGGCGCGATGGCGACGGGCACGCACGGCACCGGGATCGACCTGGGTTCGCTGTCGACCTTTGCCCGCGGCTTCCGCTTCG
TCGATGCGGCGGGCGAGGTGCATTGGTGCGACGCGCAGACCAACGCCGATCTCTATCAGGCGCAGCGCCTGTCGCTCGGC
CTGTTCGGCGTCGTCACCGAAATCGACGTCGCGGTCGTCCCCGCCTTTCACCTCGCCGAACGGATCGAAAAGCGCCGCTG
GGCGGAGGTGCGCGAAAGCTATGACGCGCTGGCGCAGCGGCATCGTCACGTCGAATTCTGGTTCTTTCCGCACAGCGACC
AGGTGATCCTGAAAACGCTCGACCCGTGCGACCCGTGCGATCCGCCGCCGACGACGACCGACATGGAGGAGGCGACCTTT
CGCCGCATCCTCAATGTATCGGCGCGCCTCCCTTTCCTCACACCCTTCCTCCAGCGACTGATGATGAAAAGCCCGATTGC
GGGGCGCCGCCGCGGTCCCGCGCACTGCATCTTTCCGTCAGACCGCACGATCCGCTTCGAGGAAATGGAATATGAAATGC
CGCGCGCCGTCGGGCTGGAGACGCTCGAAGAGGTCGTCGGCTGGATTCGCAGAAAACGCCTGCCGGTGACCTTTCCTTTC
GAATATCGCTCCGTCGCCGCCGACGACATCTGGATGAGCCCGATGAACGCCGGGCCGGTCGCTGCCATTTCGATGCACCA
ATATGCGAAAATACCCTGGCAAAATCTGTTTGCCGAGGCTGAAGCGATTTTTCGTGGCCATGGCGGGCGCCCGCACTGGG
CCAAGCGCCACAGCCTGACCCGCGCCGACGTCGCCACCCTCTACCCGATGGCGCCGCGCTACATTGCGGTCCGGCGCGCT
GCCGACCCGGCGGGCAAATTCCTGAATCCCCATCTCGAAAGCCTCTTCGCATGA

Upstream 100 bases:

>100_bases
AAGGTGGCGCGCGGCGTGCGCGAAGCGGTGCAGATCCATTTCGCGCGGCGTCTTGCGGCCGAGTGACGGCAGCCTTGTCG
GGAGCGAAGGAGGGAGCGGC

Downstream 100 bases:

>100_bases
CGAGCGACCGCCTCCTGCACGACGCGCTGATCGGTCGGCAGGGGAGCCGCGCCGACCTCAACACCCCGGTGCTGATTCTC
GACCGCGAGGCGCTCGACCG

Product: FAD-linked oxidoreductase

Products: NA

Alternate protein names: Alditol oxidase [H]

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSWSNWSGSVAARAAIARPQSEDELAALIRGAHRLRVAGAGHSFMPLCESDELIVSLDAMPGEIRVAPDRRTARIPAGWS
IRRLTAALWDHGLALANQGDVNPQSLAGAMATGTHGTGIDLGSLSTFARGFRFVDAAGEVHWCDAQTNADLYQAQRLSLG
LFGVVTEIDVAVVPAFHLAERIEKRRWAEVRESYDALAQRHRHVEFWFFPHSDQVILKTLDPCDPCDPPPTTTDMEEATF
RRILNVSARLPFLTPFLQRLMMKSPIAGRRRGPAHCIFPSDRTIRFEEMEYEMPRAVGLETLEEVVGWIRRKRLPVTFPF
EYRSVAADDIWMSPMNAGPVAAISMHQYAKIPWQNLFAEAEAIFRGHGGRPHWAKRHSLTRADVATLYPMAPRYIAVRRA
ADPAGKFLNPHLESLFA

Sequences:

>Translated_417_residues
MSWSNWSGSVAARAAIARPQSEDELAALIRGAHRLRVAGAGHSFMPLCESDELIVSLDAMPGEIRVAPDRRTARIPAGWS
IRRLTAALWDHGLALANQGDVNPQSLAGAMATGTHGTGIDLGSLSTFARGFRFVDAAGEVHWCDAQTNADLYQAQRLSLG
LFGVVTEIDVAVVPAFHLAERIEKRRWAEVRESYDALAQRHRHVEFWFFPHSDQVILKTLDPCDPCDPPPTTTDMEEATF
RRILNVSARLPFLTPFLQRLMMKSPIAGRRRGPAHCIFPSDRTIRFEEMEYEMPRAVGLETLEEVVGWIRRKRLPVTFPF
EYRSVAADDIWMSPMNAGPVAAISMHQYAKIPWQNLFAEAEAIFRGHGGRPHWAKRHSLTRADVATLYPMAPRYIAVRRA
ADPAGKFLNPHLESLFA
>Mature_416_residues
SWSNWSGSVAARAAIARPQSEDELAALIRGAHRLRVAGAGHSFMPLCESDELIVSLDAMPGEIRVAPDRRTARIPAGWSI
RRLTAALWDHGLALANQGDVNPQSLAGAMATGTHGTGIDLGSLSTFARGFRFVDAAGEVHWCDAQTNADLYQAQRLSLGL
FGVVTEIDVAVVPAFHLAERIEKRRWAEVRESYDALAQRHRHVEFWFFPHSDQVILKTLDPCDPCDPPPTTTDMEEATFR
RILNVSARLPFLTPFLQRLMMKSPIAGRRRGPAHCIFPSDRTIRFEEMEYEMPRAVGLETLEEVVGWIRRKRLPVTFPFE
YRSVAADDIWMSPMNAGPVAAISMHQYAKIPWQNLFAEAEAIFRGHGGRPHWAKRHSLTRADVATLYPMAPRYIAVRRAA
DPAGKFLNPHLESLFA

Specific function: Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323553, Length=275, Percent_Identity=25.4545454545455, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007173
- InterPro:   IPR016166
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]

EC number: =1.1.3.41 [H]

Molecular weight: Translated: 46621; Mature: 46490

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSNWSGSVAARAAIARPQSEDELAALIRGAHRLRVAGAGHSFMPLCESDELIVSLDAM
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECC
PGEIRVAPDRRTARIPAGWSIRRLTAALWDHGLALANQGDVNPQSLAGAMATGTHGTGID
CCEEEECCCCCCEECCCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCCCCCCCC
LGSLSTFARGFRFVDAAGEVHWCDAQTNADLYQAQRLSLGLFGVVTEIDVAVVPAFHLAE
CCHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIEKRRWAEVRESYDALAQRHRHVEFWFFPHSDQVILKTLDPCDPCDPPPTTTDMEEATF
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHH
RRILNVSARLPFLTPFLQRLMMKSPIAGRRRGPAHCIFPSDRTIRFEEMEYEMPRAVGLE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEHHHHHHCCHHHHHH
TLEEVVGWIRRKRLPVTFPFEYRSVAADDIWMSPMNAGPVAAISMHQYAKIPWQNLFAEA
HHHHHHHHHHHCCCCEECCCHHHHHCCCHHEECCCCCCCEEEEEHHHHHCCCHHHHHHHH
EAIFRGHGGRPHWAKRHSLTRADVATLYPMAPRYIAVRRAADPAGKFLNPHLESLFA
HHHHHCCCCCCCHHHHHCCCHHHHHHHCCCCCHHEEEECCCCCCHHHCCHHHHHHCC
>Mature Secondary Structure 
SWSNWSGSVAARAAIARPQSEDELAALIRGAHRLRVAGAGHSFMPLCESDELIVSLDAM
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECC
PGEIRVAPDRRTARIPAGWSIRRLTAALWDHGLALANQGDVNPQSLAGAMATGTHGTGID
CCEEEECCCCCCEECCCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCCCCCCCC
LGSLSTFARGFRFVDAAGEVHWCDAQTNADLYQAQRLSLGLFGVVTEIDVAVVPAFHLAE
CCHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIEKRRWAEVRESYDALAQRHRHVEFWFFPHSDQVILKTLDPCDPCDPPPTTTDMEEATF
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHH
RRILNVSARLPFLTPFLQRLMMKSPIAGRRRGPAHCIFPSDRTIRFEEMEYEMPRAVGLE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEHHHHHHCCHHHHHH
TLEEVVGWIRRKRLPVTFPFEYRSVAADDIWMSPMNAGPVAAISMHQYAKIPWQNLFAEA
HHHHHHHHHHHCCCCEECCCHHHHHCCCHHEECCCCCCCEEEEEHHHHHCCCHHHHHHHH
EAIFRGHGGRPHWAKRHSLTRADVATLYPMAPRYIAVRRAADPAGKFLNPHLESLFA
HHHHHCCCCCCCHHHHHCCCHHHHHHHCCCCCHHEEEECCCCCCHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]