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The map label for this gene is yfgC [C]

Identifier: 103488646

GI number: 103488646

Start: 3324897

End: 3326300

Strand: Reverse

Name: yfgC [C]

Synonym: Sala_3171

Alternate gene names: 103488646

Gene position: 3326300-3324897 (Counterclockwise)

Preceding gene: 103488647

Following gene: 103488645

Centisome position: 99.44

GC content: 66.17

Gene sequence:

>1404_bases
ATGACCGCTTTCCCGCCGCAACCCGCGTCCGGCGCGCATGGCTTGCGCTCCCTTTTTCATATCCTGCTCACGCTGCTCGC
GATGGTCGCCATCGCGGTGCGCCCCGCGGCCGCCCAGTCGATCCTGCGCGATGCCGAAACCGAGGCGCTGTTTCAGGATA
TGATGGACCCGCTGCTCGTCGCCGCGGGATTGCAGCCGGGACAGGTGCGCGTCCACCTGCTCGGCGATCGCAGCATCAAC
GCCTTTGTCGCGGGCAGCCAGGACATCTATGTCTTCAGCGGGCTGATCGAAGCCGCCGACAGCGCCGAAGAGGTGCAGGG
CGTGCTCGCGCACGAACTGGGGCATGTGATGGGCGGCCACGCCATCCGCATCAACGATGGCGTGAGCGCCGCGACCAGCA
TCTCGCTGCTCAGCCTGCTGCTCGGCGCCGCGGCGATCGCGGCGGGCGGCGGCGAGGCGGGCATGGGCATCATGATGGCG
GGGCAGCAGGCGGCGCTCGGCAAGTTCCTCGCCTTCAGCCGCGTCCAGGAATCGACCGCTGACGCCGCCGGCGCACAATA
TCTGTCGAAGGCGGGGATCAGCGGGCGCGGCAGCCTGGCCTTCTTCAAGAAGCTCCAGAATCTGGAGTTCCGCTATGGCA
TCAAGCAGGACGACGACCAGGCCTATGGCCGGACGCACCCGATGTCGGGCGACCGTATCCAGGCGCTGCGCGAAGTCTAT
GTCATCGACCCCGCATGGAACAAGCCGGCTGACCCGGCGATCGAAAAGCGGTTCCAGCGCATCAAGGCCAAATTGTTGGG
CTATATGGCCGAGCCCGAACGGACGCTGCGCAAATTTCCGGAAAGCGACCGCAGTGTTCCGGCGCGCTATGCGCGCGCCT
ATGCCTGGCACAAGAGCGCCTATCCGCAAAAGGCGCTGGCCGAAGTCGAGGCGCTGCTCGAAGCCGACCCCGACGACCCC
TATTTCCTCGAACTCGAAGGGCAGATCCTGCTCGAATCGGGGCGCCCCGACGAGGCGATCCCCCCGCTGCGCCAGGCGGT
GGCCAAATCGCGCTCGCAACCCCTGATTGCCGCCACGCTGGGCCATGCGCTGATCGCGACCGAAGAGCCCGCCCACTATG
CCGAGGCCGAAAAGGTCCTGAAAACCGCGGTCGCGCTCGACAACCAGAATCCCTTTGCCTGGTATCAGCTTGGCATCGTC
TATGCCAACAAGGGCGATCAGGCCCGCGCCGCGCTCGCTTCGGCCGAACGCTATAGCCTCGAGGGTAGACAACCGGCGCT
GGCGCTGCGTAATGCCGAAATGGCGATGCAGGGCCTGCCGCAGGGATCGCCCGACTGGATTCGCGCACAGGATATTTCGC
TGGTCGCTCGCGCCGAGGTGGAACGCGAGCGTAAACGGCGTTAG

Upstream 100 bases:

>100_bases
GCGGAAATCGCACGCCGACCTTGCGCCTGCGCGCGCTGACCCCCAATAAGCCCTCATGGCTTCACTCGGGGTTCAGGCGC
GCGGCGCAAGAAGGGCGGCG

Downstream 100 bases:

>100_bases
ACTCGCGGGAAGCAAGCGGGGGACCGCATCGCCTAACCGATGCGCAAGGGCAGCAAGTGACAGAGAATAAAGACGAATAT
TACCAGCCATGGCTGCGCGA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTAFPPQPASGAHGLRSLFHILLTLLAMVAIAVRPAAAQSILRDAETEALFQDMMDPLLVAAGLQPGQVRVHLLGDRSIN
AFVAGSQDIYVFSGLIEAADSAEEVQGVLAHELGHVMGGHAIRINDGVSAATSISLLSLLLGAAAIAAGGGEAGMGIMMA
GQQAALGKFLAFSRVQESTADAAGAQYLSKAGISGRGSLAFFKKLQNLEFRYGIKQDDDQAYGRTHPMSGDRIQALREVY
VIDPAWNKPADPAIEKRFQRIKAKLLGYMAEPERTLRKFPESDRSVPARYARAYAWHKSAYPQKALAEVEALLEADPDDP
YFLELEGQILLESGRPDEAIPPLRQAVAKSRSQPLIAATLGHALIATEEPAHYAEAEKVLKTAVALDNQNPFAWYQLGIV
YANKGDQARAALASAERYSLEGRQPALALRNAEMAMQGLPQGSPDWIRAQDISLVARAEVERERKRR

Sequences:

>Translated_467_residues
MTAFPPQPASGAHGLRSLFHILLTLLAMVAIAVRPAAAQSILRDAETEALFQDMMDPLLVAAGLQPGQVRVHLLGDRSIN
AFVAGSQDIYVFSGLIEAADSAEEVQGVLAHELGHVMGGHAIRINDGVSAATSISLLSLLLGAAAIAAGGGEAGMGIMMA
GQQAALGKFLAFSRVQESTADAAGAQYLSKAGISGRGSLAFFKKLQNLEFRYGIKQDDDQAYGRTHPMSGDRIQALREVY
VIDPAWNKPADPAIEKRFQRIKAKLLGYMAEPERTLRKFPESDRSVPARYARAYAWHKSAYPQKALAEVEALLEADPDDP
YFLELEGQILLESGRPDEAIPPLRQAVAKSRSQPLIAATLGHALIATEEPAHYAEAEKVLKTAVALDNQNPFAWYQLGIV
YANKGDQARAALASAERYSLEGRQPALALRNAEMAMQGLPQGSPDWIRAQDISLVARAEVERERKRR
>Mature_466_residues
TAFPPQPASGAHGLRSLFHILLTLLAMVAIAVRPAAAQSILRDAETEALFQDMMDPLLVAAGLQPGQVRVHLLGDRSINA
FVAGSQDIYVFSGLIEAADSAEEVQGVLAHELGHVMGGHAIRINDGVSAATSISLLSLLLGAAAIAAGGGEAGMGIMMAG
QQAALGKFLAFSRVQESTADAAGAQYLSKAGISGRGSLAFFKKLQNLEFRYGIKQDDDQAYGRTHPMSGDRIQALREVYV
IDPAWNKPADPAIEKRFQRIKAKLLGYMAEPERTLRKFPESDRSVPARYARAYAWHKSAYPQKALAEVEALLEADPDDPY
FLELEGQILLESGRPDEAIPPLRQAVAKSRSQPLIAATLGHALIATEEPAHYAEAEKVLKTAVALDNQNPFAWYQLGIVY
ANKGDQARAALASAERYSLEGRQPALALRNAEMAMQGLPQGSPDWIRAQDISLVARAEVERERKRR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=359, Percent_Identity=23.6768802228412, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 50451; Mature: 50320

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50293 TPR_REGION ; PS00435 PEROXIDASE_1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFPPQPASGAHGLRSLFHILLTLLAMVAIAVRPAAAQSILRDAETEALFQDMMDPLLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGLQPGQVRVHLLGDRSINAFVAGSQDIYVFSGLIEAADSAEEVQGVLAHELGHVMGGH
HCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
AIRINDGVSAATSISLLSLLLGAAAIAAGGGEAGMGIMMAGQQAALGKFLAFSRVQESTA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
DAAGAQYLSKAGISGRGSLAFFKKLQNLEFRYGIKQDDDQAYGRTHPMSGDRIQALREVY
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHE
VIDPAWNKPADPAIEKRFQRIKAKLLGYMAEPERTLRKFPESDRSVPARYARAYAWHKSA
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
YPQKALAEVEALLEADPDDPYFLELEGQILLESGRPDEAIPPLRQAVAKSRSQPLIAATL
CCHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHHHHCCCCCEEHHHH
GHALIATEEPAHYAEAEKVLKTAVALDNQNPFAWYQLGIVYANKGDQARAALASAERYSL
CCHHEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCC
EGRQPALALRNAEMAMQGLPQGSPDWIRAQDISLVARAEVERERKRR
CCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAFPPQPASGAHGLRSLFHILLTLLAMVAIAVRPAAAQSILRDAETEALFQDMMDPLLV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGLQPGQVRVHLLGDRSINAFVAGSQDIYVFSGLIEAADSAEEVQGVLAHELGHVMGGH
HCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
AIRINDGVSAATSISLLSLLLGAAAIAAGGGEAGMGIMMAGQQAALGKFLAFSRVQESTA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
DAAGAQYLSKAGISGRGSLAFFKKLQNLEFRYGIKQDDDQAYGRTHPMSGDRIQALREVY
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHE
VIDPAWNKPADPAIEKRFQRIKAKLLGYMAEPERTLRKFPESDRSVPARYARAYAWHKSA
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
YPQKALAEVEALLEADPDDPYFLELEGQILLESGRPDEAIPPLRQAVAKSRSQPLIAATL
CCHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHHHHCCCCCEEHHHH
GHALIATEEPAHYAEAEKVLKTAVALDNQNPFAWYQLGIVYANKGDQARAALASAERYSL
CCHHEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCC
EGRQPALALRNAEMAMQGLPQGSPDWIRAQDISLVARAEVERERKRR
CCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]