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The map label for this gene is 103488611

Identifier: 103488611

GI number: 103488611

Start: 3288216

End: 3288977

Strand: Direct

Name: 103488611

Synonym: Sala_3136

Alternate gene names: NA

Gene position: 3288216-3288977 (Clockwise)

Preceding gene: 103488601

Following gene: 103488612

Centisome position: 98.3

GC content: 64.96

Gene sequence:

>762_bases
ATGACCGGCTGGGCGATCCTTTTGTCCGCGCTTGCGATGACCGCCATCGTGGGCGTGCGCTATCTTGTGACCAGCGGCGC
CTTCGCCTTCGCCACGCGCCTTAGGCACCCCGGCCTCTATCGCGGGCTCGAACCGCAGATGCGCCGCGAGATCGGCTGGA
GCCTTGCCAGCGCCGCCATTTACGGCATCCCCGCTGGCGTGGTCGCCTGGGGATGGCAGGCGCATGGCTGGACGCGCATC
TATGCCGACGTGGGCGCCTTTCCGCTCTGGTATCTGCCCGTCAGCCTGCTCCTCTATCTGCTGCTCCACGACACATGGTT
TTACTGGACGCATCGCTGGATGCACCGCCCGCGCCTGTTCCGCCTCGCGCACGCCGTCCATCATGCGAGCCGCCCGCCGA
CCGCCTGGGCGGCGATGAGTTTTCATCCGATCGAGGCAGTCACCGGCGCCATCGTCATCCCTGCGCTCGTTTTTGTCATT
CCCATCCATGTCGCGGTGCTGGGCCTTGTTCTGGCGATCATGACGATCATGGGGGTCGGCAATCATATGGGGTGGGAGAT
GTTTCCGCGCGCGCTTGTTCATGGACCAGCAGGGCGCTGGCTGATAACCGCGACGCATCACCAGGCGCATCATGCCGTCT
ACCGGGGGAATTATGGACTTTATTTCCGTTTCTGGGATCGCGCGTGCGGCACGGACATCGGGCTTGGCCGCTTTGATCCT
GTGCGCCGTGACGGCGAACGCCCCGCCGCCGCCGACGGTTGA

Upstream 100 bases:

>100_bases
GCATTTATCGATGTTCGGCCCCACCATGTCTCCGCCCTAGCCGCGCTTCGCGCCCGTGCAAAGCCATTGCAACGCGCCGC
CGAACGGCTAGCCTCCCGCC

Downstream 100 bases:

>100_bases
GGTCAGCGTTACCGGGCTGCGCAGCGCCAGGGGGCAGTTGCTCGTCTGCCTGACGACCCAGGCGAGCGCCTTTCCCGATT
GCAGCAAGGACAAGGCTTCG

Product: sterol desaturase

Products: NA

Alternate protein names: Fatty Acid Hydroxylase; Sterol Desaturase; Sterol Desaturase Superfamily; C-5 Sterol Desaturase; Desaturase; Fatty Acid Hydroxylase Superfamily

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTGWAILLSALAMTAIVGVRYLVTSGAFAFATRLRHPGLYRGLEPQMRREIGWSLASAAIYGIPAGVVAWGWQAHGWTRI
YADVGAFPLWYLPVSLLLYLLLHDTWFYWTHRWMHRPRLFRLAHAVHHASRPPTAWAAMSFHPIEAVTGAIVIPALVFVI
PIHVAVLGLVLAIMTIMGVGNHMGWEMFPRALVHGPAGRWLITATHHQAHHAVYRGNYGLYFRFWDRACGTDIGLGRFDP
VRRDGERPAAADG

Sequences:

>Translated_253_residues
MTGWAILLSALAMTAIVGVRYLVTSGAFAFATRLRHPGLYRGLEPQMRREIGWSLASAAIYGIPAGVVAWGWQAHGWTRI
YADVGAFPLWYLPVSLLLYLLLHDTWFYWTHRWMHRPRLFRLAHAVHHASRPPTAWAAMSFHPIEAVTGAIVIPALVFVI
PIHVAVLGLVLAIMTIMGVGNHMGWEMFPRALVHGPAGRWLITATHHQAHHAVYRGNYGLYFRFWDRACGTDIGLGRFDP
VRRDGERPAAADG
>Mature_252_residues
TGWAILLSALAMTAIVGVRYLVTSGAFAFATRLRHPGLYRGLEPQMRREIGWSLASAAIYGIPAGVVAWGWQAHGWTRIY
ADVGAFPLWYLPVSLLLYLLLHDTWFYWTHRWMHRPRLFRLAHAVHHASRPPTAWAAMSFHPIEAVTGAIVIPALVFVIP
IHVAVLGLVLAIMTIMGVGNHMGWEMFPRALVHGPAGRWLITATHHQAHHAVYRGNYGLYFRFWDRACGTDIGLGRFDPV
RRDGERPAAADG

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI68160945, Length=208, Percent_Identity=28.3653846153846, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI68160941, Length=208, Percent_Identity=28.3653846153846, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI5803157, Length=266, Percent_Identity=23.3082706766917, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI62865628, Length=166, Percent_Identity=27.710843373494, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323085, Length=258, Percent_Identity=28.2945736434109, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321497, Length=164, Percent_Identity=28.0487804878049, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28329; Mature: 28198

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGWAILLSALAMTAIVGVRYLVTSGAFAFATRLRHPGLYRGLEPQMRREIGWSLASAAI
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
YGIPAGVVAWGWQAHGWTRIYADVGAFPLWYLPVSLLLYLLLHDTWFYWTHRWMHRPRLF
HCCCHHHHHCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RLAHAVHHASRPPTAWAAMSFHPIEAVTGAIVIPALVFVIPIHVAVLGLVLAIMTIMGVG
HHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NHMGWEMFPRALVHGPAGRWLITATHHQAHHAVYRGNYGLYFRFWDRACGTDIGLGRFDP
CCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHEEECCCEEEEEEECHHCCCCCCCCCCCC
VRRDGERPAAADG
HHCCCCCCCCCCC
>Mature Secondary Structure 
TGWAILLSALAMTAIVGVRYLVTSGAFAFATRLRHPGLYRGLEPQMRREIGWSLASAAI
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
YGIPAGVVAWGWQAHGWTRIYADVGAFPLWYLPVSLLLYLLLHDTWFYWTHRWMHRPRLF
HCCCHHHHHCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RLAHAVHHASRPPTAWAAMSFHPIEAVTGAIVIPALVFVIPIHVAVLGLVLAIMTIMGVG
HHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NHMGWEMFPRALVHGPAGRWLITATHHQAHHAVYRGNYGLYFRFWDRACGTDIGLGRFDP
CCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHEEECCCEEEEEEECHHCCCCCCCCCCCC
VRRDGERPAAADG
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA