| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is phy [H]
Identifier: 103488599
GI number: 103488599
Start: 3276105
End: 3277133
Strand: Reverse
Name: phy [H]
Synonym: Sala_3124
Alternate gene names: 103488599
Gene position: 3277133-3276105 (Counterclockwise)
Preceding gene: 103488602
Following gene: 103488598
Centisome position: 97.97
GC content: 68.61
Gene sequence:
>1029_bases ATGTCCGTCACCCGTCAGGCGAAGTTGCTGACTTCGCTCGCCTTTGCCTCGCTGCTCGCCGGATGCGTCGCGAGCGAACC CATCATCAACGGCCTGCCGCCGGTGCAGGTGACGGCGAGCGGCGAGACCGAGCCGGTCGGCACCAGCCGCGCCGACGCCG CCGACGATCCCGCGGTCTGGGTCGATCCCGCCAATCCGAATCGCGCGCTGATCGTCGCGACCGACAAGAAGGCCGGGCTG CACGTCTATGACCTTGCCGGCAAGGATGTCGCCTTCATCGAGGCCGGGCTGGTCAACAATGTCGACATGGCGGGCGACAT CATCGTCGCGAGCGACCGCAACGACGGGATGACCGCGCATCTCGCGATCTTCCGCCTCGACGGCGCCAAGCCCGCAATCA CCGCGCTCGGCCGCGTCGCGGCGGGGCCGGGCGAGGCCTATGGCCTGTGCGTCAAGAAAAGCGCGCCGGGCGAGCCGATC ACCGCGGCGCTGATCGTCAAGGACGGCAGCGTGCGCGTCGGCACGCTGGGGCTGCCCGCGGGCGCGGCGCCGACCTTTAC CATCGAATGGGAGCACAAGATCCCGACCCAGTCCGAAGGCTGCGTCTTCGACGGCGACACGCTGTATGTCGGCGAAGAGG TCGGCGGCCTTTGGGAGCTGAAGCAAAATGGCAAGGGCGCGTCCGCGCGCCTGGTCGCGCCGATCGACAACCAACGCCTC GTCGCCGACCTCGAAGGCCTGGCGACGATCGACCACAAGGGCCAGCGCTACCTGATCGCGTCGAGCCAGGGCGACAATGC CTATGCCGTGTTCCGCCTGCCGGGCGTCGACTATATCGGCCGCTTCGCGGTCGCCGCGGGAGCGTTCGGCGCGACGAGCG AAACCGACGGGATCGAGGCGGTGGCGGGCAATTTCGGTCCGGCCTACCCCGATGGCATCTTCATCGCGCAGGACGGCGAC AACGGCGCCAAGGCGCAAAACTTCAAGCTGGTGCGCTGGGACCAGATCGCGGCGGCGCTGGGGCTGTAA
Upstream 100 bases:
>100_bases TTTATATGACTGAAATATTGTGCGATTGACGCGAAGGCGCCGAGATGAAAGGGGGCGCGGTCAAGCGCGCGGATGCGCAG CATGAACCAGGGGAATCGCC
Downstream 100 bases:
>100_bases TATCGCGTCAATAAATCGTCGTTCCCGCACAGGCGGGGGCCGCAATCGGTTTGAAGCGGCGAGGCCGGAATAGACCGACA GCGGCCCCTGCCTGTGCGGG
Product: 3-phytase
Products: NA
Alternate protein names: Myo-inositol-hexaphosphate 3-phosphohydrolase; Phytate 3-phosphatase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSVTRQAKLLTSLAFASLLAGCVASEPIINGLPPVQVTASGETEPVGTSRADAADDPAVWVDPANPNRALIVATDKKAGL HVYDLAGKDVAFIEAGLVNNVDMAGDIIVASDRNDGMTAHLAIFRLDGAKPAITALGRVAAGPGEAYGLCVKKSAPGEPI TAALIVKDGSVRVGTLGLPAGAAPTFTIEWEHKIPTQSEGCVFDGDTLYVGEEVGGLWELKQNGKGASARLVAPIDNQRL VADLEGLATIDHKGQRYLIASSQGDNAYAVFRLPGVDYIGRFAVAAGAFGATSETDGIEAVAGNFGPAYPDGIFIAQDGD NGAKAQNFKLVRWDQIAAALGL
Sequences:
>Translated_342_residues MSVTRQAKLLTSLAFASLLAGCVASEPIINGLPPVQVTASGETEPVGTSRADAADDPAVWVDPANPNRALIVATDKKAGL HVYDLAGKDVAFIEAGLVNNVDMAGDIIVASDRNDGMTAHLAIFRLDGAKPAITALGRVAAGPGEAYGLCVKKSAPGEPI TAALIVKDGSVRVGTLGLPAGAAPTFTIEWEHKIPTQSEGCVFDGDTLYVGEEVGGLWELKQNGKGASARLVAPIDNQRL VADLEGLATIDHKGQRYLIASSQGDNAYAVFRLPGVDYIGRFAVAAGAFGATSETDGIEAVAGNFGPAYPDGIFIAQDGD NGAKAQNFKLVRWDQIAAALGL >Mature_341_residues SVTRQAKLLTSLAFASLLAGCVASEPIINGLPPVQVTASGETEPVGTSRADAADDPAVWVDPANPNRALIVATDKKAGLH VYDLAGKDVAFIEAGLVNNVDMAGDIIVASDRNDGMTAHLAIFRLDGAKPAITALGRVAAGPGEAYGLCVKKSAPGEPIT AALIVKDGSVRVGTLGLPAGAAPTFTIEWEHKIPTQSEGCVFDGDTLYVGEEVGGLWELKQNGKGASARLVAPIDNQRLV ADLEGLATIDHKGQRYLIASSQGDNAYAVFRLPGVDYIGRFAVAAGAFGATSETDGIEAVAGNFGPAYPDGIFIAQDGDN GAKAQNFKLVRWDQIAAALGL
Specific function: Unknown
COG id: COG4247
COG function: function code I; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003431 [H]
Pfam domain/function: PF02333 Phytase [H]
EC number: =3.1.3.8 [H]
Molecular weight: Translated: 35263; Mature: 35132
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTRQAKLLTSLAFASLLAGCVASEPIINGLPPVQVTASGETEPVGTSRADAADDPAVW CCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE VDPANPNRALIVATDKKAGLHVYDLAGKDVAFIEAGLVNNVDMAGDIIVASDRNDGMTAH EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEE LAIFRLDGAKPAITALGRVAAGPGEAYGLCVKKSAPGEPITAALIVKDGSVRVGTLGLPA EEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCC GAAPTFTIEWEHKIPTQSEGCVFDGDTLYVGEEVGGLWELKQNGKGASARLVAPIDNQRL CCCCEEEEEECCCCCCCCCCEEECCCEEEECCCCCCEEEEECCCCCCCEEEEECCCCCEE VADLEGLATIDHKGQRYLIASSQGDNAYAVFRLPGVDYIGRFAVAAGAFGATSETDGIEA EEECCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEE VAGNFGPAYPDGIFIAQDGDNGAKAQNFKLVRWDQIAAALGL EECCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHCC >Mature Secondary Structure SVTRQAKLLTSLAFASLLAGCVASEPIINGLPPVQVTASGETEPVGTSRADAADDPAVW CCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE VDPANPNRALIVATDKKAGLHVYDLAGKDVAFIEAGLVNNVDMAGDIIVASDRNDGMTAH EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEE LAIFRLDGAKPAITALGRVAAGPGEAYGLCVKKSAPGEPITAALIVKDGSVRVGTLGLPA EEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCC GAAPTFTIEWEHKIPTQSEGCVFDGDTLYVGEEVGGLWELKQNGKGASARLVAPIDNQRL CCCCEEEEEECCCCCCCCCCEEECCCEEEECCCCCCEEEEECCCCCCCEEEEECCCCCEE VADLEGLATIDHKGQRYLIASSQGDNAYAVFRLPGVDYIGRFAVAAGAFGATSETDGIEA EEECCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEE VAGNFGPAYPDGIFIAQDGDNGAKAQNFKLVRWDQIAAALGL EECCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377; 7592393 [H]