Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488588

Identifier: 103488588

GI number: 103488588

Start: 3262121

End: 3262435

Strand: Direct

Name: 103488588

Synonym: Sala_3112

Alternate gene names: NA

Gene position: 3262121-3262435 (Clockwise)

Preceding gene: 103488587

Following gene: 103488590

Centisome position: 97.52

GC content: 64.44

Gene sequence:

>315_bases
ATGCTGAATCTGGTAGTCATCGCGGTGCTTGCTGCGGCGTCTTCCGCCGAAGCGGGCGTCGCCGAACGGGCGCCTCCGGC
GCGAGCGCCGTCGGAGATGACCAATGCCGAGATCAAGGCCTATAATGAAGGGCTGGCGGCCACCCATCCCCACTATATCA
AGTGCCGCAAGATTGAGGAGATTGGCTCGTGGGTGAAGAAGGCGCGTGTGTGCCGCACCAATGAGCAGTGGAAGCAGGCG
TGGGCGCAGGGCAACCAGAATGCGCGCGACACCGCCGAGGCGATGACGCGCGCGCCGGTCAACGGCAGCAACTGA

Upstream 100 bases:

>100_bases
GGCAATCAGAATGCGCGCGACACGGCCGAGGCGATGACGAGCAAGGCGGGCAATTCAAACTGATCCGCCGGTCGGTGATC
GAACAGGAAAGGGATATTCC

Downstream 100 bases:

>100_bases
CGATCATCGAAGAAGGCTGGCGCAGCGTCAGCCTGTGCTCAGCACCAACCCGCCGTCGCCCGGCACGAGCGACCGCGCTC
GATCTCGCCAACAATTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEEIGSWVKKARVCRTNEQWKQA
WAQGNQNARDTAEAMTRAPVNGSN

Sequences:

>Translated_104_residues
MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEEIGSWVKKARVCRTNEQWKQA
WAQGNQNARDTAEAMTRAPVNGSN
>Mature_104_residues
MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEEIGSWVKKARVCRTNEQWKQA
WAQGNQNARDTAEAMTRAPVNGSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11259; Mature: 11259

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEE
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCHHHHHHHHH
IGSWVKKARVCRTNEQWKQAWAQGNQNARDTAEAMTRAPVNGSN
HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEE
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCHHHHHHHHH
IGSWVKKARVCRTNEQWKQAWAQGNQNARDTAEAMTRAPVNGSN
HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA