| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488588
Identifier: 103488588
GI number: 103488588
Start: 3262121
End: 3262435
Strand: Direct
Name: 103488588
Synonym: Sala_3112
Alternate gene names: NA
Gene position: 3262121-3262435 (Clockwise)
Preceding gene: 103488587
Following gene: 103488590
Centisome position: 97.52
GC content: 64.44
Gene sequence:
>315_bases ATGCTGAATCTGGTAGTCATCGCGGTGCTTGCTGCGGCGTCTTCCGCCGAAGCGGGCGTCGCCGAACGGGCGCCTCCGGC GCGAGCGCCGTCGGAGATGACCAATGCCGAGATCAAGGCCTATAATGAAGGGCTGGCGGCCACCCATCCCCACTATATCA AGTGCCGCAAGATTGAGGAGATTGGCTCGTGGGTGAAGAAGGCGCGTGTGTGCCGCACCAATGAGCAGTGGAAGCAGGCG TGGGCGCAGGGCAACCAGAATGCGCGCGACACCGCCGAGGCGATGACGCGCGCGCCGGTCAACGGCAGCAACTGA
Upstream 100 bases:
>100_bases GGCAATCAGAATGCGCGCGACACGGCCGAGGCGATGACGAGCAAGGCGGGCAATTCAAACTGATCCGCCGGTCGGTGATC GAACAGGAAAGGGATATTCC
Downstream 100 bases:
>100_bases CGATCATCGAAGAAGGCTGGCGCAGCGTCAGCCTGTGCTCAGCACCAACCCGCCGTCGCCCGGCACGAGCGACCGCGCTC GATCTCGCCAACAATTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEEIGSWVKKARVCRTNEQWKQA WAQGNQNARDTAEAMTRAPVNGSN
Sequences:
>Translated_104_residues MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEEIGSWVKKARVCRTNEQWKQA WAQGNQNARDTAEAMTRAPVNGSN >Mature_104_residues MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEEIGSWVKKARVCRTNEQWKQA WAQGNQNARDTAEAMTRAPVNGSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11259; Mature: 11259
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEE CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCHHHHHHHHH IGSWVKKARVCRTNEQWKQAWAQGNQNARDTAEAMTRAPVNGSN HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLNLVVIAVLAAASSAEAGVAERAPPARAPSEMTNAEIKAYNEGLAATHPHYIKCRKIEE CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCHHHHHHHHH IGSWVKKARVCRTNEQWKQAWAQGNQNARDTAEAMTRAPVNGSN HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA