Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488585

Identifier: 103488585

GI number: 103488585

Start: 3259420

End: 3260445

Strand: Reverse

Name: 103488585

Synonym: Sala_3109

Alternate gene names: NA

Gene position: 3260445-3259420 (Counterclockwise)

Preceding gene: 103488589

Following gene: 103488580

Centisome position: 97.47

GC content: 67.93

Gene sequence:

>1026_bases
ATGCCCGCCGCGCCATCTGTGTCCGCCGTAATCGACGACGCCGCCTGGCTGGCGCATCGCTATGATCCCGACCACGACGC
CTTTCACTTCCGCCGGGTATCGCGGTCCGCGCGCATGGCGGTTCCCTTCCTCACCGATCAGCATCTGGGCGAGGAAGCGT
CGCCGCTGGTGCTGCGCCGCGCCGACTGCACGGCGACGAACGGGCCGCGGCGGGCGCCGATCCATTTCCTCTTCCATTCG
GCCTATTGCGCGTCGACGATGCTCGCGCACGTGCTCGATCAGCCGGGGGTGGCGACGACGCTTTCAGAACCGGTGCTGCT
CAATGACATGATCGGATGGCGTCGCCGCGGTGCCGACCCGCGGATGCACGGCCGGGTGATGGACGACGCGCTCGCCATGC
TCGGTCGCGGCTTTGCCGCTGGCGAAGCGGTGGTCGTCAAGCCTTCGAACATCTTCAACCCGCTCGCGCGAGGCGTGCTG
TTGCTGCGGCCACAGGCGCGCGCGATCCTGCTCCACGCGCCGCTTCGCGCCTTCCTGCTTTCGGTTGCCCGCAAGGGGCT
GTGGTGCCGCCTTTGGTGCCGCGAGCTTTTTGAAAATTATCTCGCCGACGGCTTCGTTCGACTGGCCTTCGGGCCACACG
ACTATTTTCGCCAATCCGACCTGCAGGTCGCGGCGATCGGCTGGCTGGCGCAGCAACAGGCCTTTGCGGCCTTGCTCGAC
TGGGCGCCCGACCGGATTGCTTCGCTCGACAGCGAAACGCTGACGCGCGATCCGGTTGCGGCGATTGCGGCGGCGATGGA
CCATTTGGGTCTTGCGGTCGACCGCGGTGCGATCGCCGACCATCCGTCGCTCGTGCGCAACAGCAAGTCGGGCGCCGCCT
TCGCTCCGGGGGAGCGACAGCGCGACCTTGCCGCGGCTGAAAGGGCTTATGGCGAGGAAATTGCGCAGGTGGTCGGCTGG
GCCGAGGCCGTCGCCGATCAGGCGGCCATTCCGATGACGCTTCCCGGCGCGCTGGCGGCACGCTGA

Upstream 100 bases:

>100_bases
AGCAATGCCGCGACGGTTCGCTTCGACGGCAGAGGCGGGAGGAGTTGCGCTGGCCATGCCCGTGCTTGCCATCGGCCGCG
CCAATCGGCAAGGTTGATCG

Downstream 100 bases:

>100_bases
CGCAACGGAAGGCCGGTTGCGGTCAAAGGTGGACATTCACTCCACCGCCGGTCCGGTCTCACCATTCCCATGGAAAAAGG
GGCGGACATCGCTGTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPAAPSVSAVIDDAAWLAHRYDPDHDAFHFRRVSRSARMAVPFLTDQHLGEEASPLVLRRADCTATNGPRRAPIHFLFHS
AYCASTMLAHVLDQPGVATTLSEPVLLNDMIGWRRRGADPRMHGRVMDDALAMLGRGFAAGEAVVVKPSNIFNPLARGVL
LLRPQARAILLHAPLRAFLLSVARKGLWCRLWCRELFENYLADGFVRLAFGPHDYFRQSDLQVAAIGWLAQQQAFAALLD
WAPDRIASLDSETLTRDPVAAIAAAMDHLGLAVDRGAIADHPSLVRNSKSGAAFAPGERQRDLAAAERAYGEEIAQVVGW
AEAVADQAAIPMTLPGALAAR

Sequences:

>Translated_341_residues
MPAAPSVSAVIDDAAWLAHRYDPDHDAFHFRRVSRSARMAVPFLTDQHLGEEASPLVLRRADCTATNGPRRAPIHFLFHS
AYCASTMLAHVLDQPGVATTLSEPVLLNDMIGWRRRGADPRMHGRVMDDALAMLGRGFAAGEAVVVKPSNIFNPLARGVL
LLRPQARAILLHAPLRAFLLSVARKGLWCRLWCRELFENYLADGFVRLAFGPHDYFRQSDLQVAAIGWLAQQQAFAALLD
WAPDRIASLDSETLTRDPVAAIAAAMDHLGLAVDRGAIADHPSLVRNSKSGAAFAPGERQRDLAAAERAYGEEIAQVVGW
AEAVADQAAIPMTLPGALAAR
>Mature_340_residues
PAAPSVSAVIDDAAWLAHRYDPDHDAFHFRRVSRSARMAVPFLTDQHLGEEASPLVLRRADCTATNGPRRAPIHFLFHSA
YCASTMLAHVLDQPGVATTLSEPVLLNDMIGWRRRGADPRMHGRVMDDALAMLGRGFAAGEAVVVKPSNIFNPLARGVLL
LRPQARAILLHAPLRAFLLSVARKGLWCRLWCRELFENYLADGFVRLAFGPHDYFRQSDLQVAAIGWLAQQQAFAALLDW
APDRIASLDSETLTRDPVAAIAAAMDHLGLAVDRGAIADHPSLVRNSKSGAAFAPGERQRDLAAAERAYGEEIAQVVGWA
EAVADQAAIPMTLPGALAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37083; Mature: 36952

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAPSVSAVIDDAAWLAHRYDPDHDAFHFRRVSRSARMAVPFLTDQHLGEEASPLVLRR
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCHHHCCCCCCCEEEEE
ADCTATNGPRRAPIHFLFHSAYCASTMLAHVLDQPGVATTLSEPVLLNDMIGWRRRGADP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCC
RMHGRVMDDALAMLGRGFAAGEAVVVKPSNIFNPLARGVLLLRPQARAILLHAPLRAFLL
HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCEEEECCCCCEEEEHHHHHHHHH
SVARKGLWCRLWCRELFENYLADGFVRLAFGPHDYFRQSDLQVAAIGWLAQQQAFAALLD
HHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEEHHHHHHHHHHHHHHHH
WAPDRIASLDSETLTRDPVAAIAAAMDHLGLAVDRGAIADHPSLVRNSKSGAAFAPGERQ
CCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCHH
RDLAAAERAYGEEIAQVVGWAEAVADQAAIPMTLPGALAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCC
>Mature Secondary Structure 
PAAPSVSAVIDDAAWLAHRYDPDHDAFHFRRVSRSARMAVPFLTDQHLGEEASPLVLRR
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCHHHCCCCCCCEEEEE
ADCTATNGPRRAPIHFLFHSAYCASTMLAHVLDQPGVATTLSEPVLLNDMIGWRRRGADP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCC
RMHGRVMDDALAMLGRGFAAGEAVVVKPSNIFNPLARGVLLLRPQARAILLHAPLRAFLL
HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCEEEECCCCCEEEEHHHHHHHHH
SVARKGLWCRLWCRELFENYLADGFVRLAFGPHDYFRQSDLQVAAIGWLAQQQAFAALLD
HHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEEHHHHHHHHHHHHHHHH
WAPDRIASLDSETLTRDPVAAIAAAMDHLGLAVDRGAIADHPSLVRNSKSGAAFAPGERQ
CCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCHH
RDLAAAERAYGEEIAQVVGWAEAVADQAAIPMTLPGALAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA