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The map label for this gene is yebA [C]

Identifier: 103488583

GI number: 103488583

Start: 3255043

End: 3255954

Strand: Direct

Name: yebA [C]

Synonym: Sala_3107

Alternate gene names: 103488583

Gene position: 3255043-3255954 (Clockwise)

Preceding gene: 103488582

Following gene: 103488584

Centisome position: 97.31

GC content: 74.23

Gene sequence:

>912_bases
ATGAGCTTGTGGACGCACTGGCGCCGCGGTGCGGTCGTCGCGCTGTTGGCGACGGCGGCCTGCGTTCCCGTGGCGGAGCG
CGAAAGCCGTCCCGCGCCGCCGCCCGCTGCGCCGCCCGTTCCCGCACCGCCGCCGCCCCAGCGGGTGCGCCATGATCTCG
TCCTGACGGGCGCCGCCGAGCAGGGCGCCGTCATCACCGGGCGCGCGTCGCCCGGCGTGCGCAGCCTGACCTTGGACGGC
GCGCCGGTCCCGGTGGCGCGCGACGGGGCTTTCCTGCTCGGCTTCGATCGCGATGCGGGGACCGAGGCCGAGCTGGTCGC
GACCTTCACCGACGGGCAGCGTATCGTGCGGCCGATCACGGTCGCCGCGGGACGCTGGCGAATCGAGCATGTGGACGCGC
CCTGGCGCGGCGGCGCAACGAGCGACGCCGATTTCGCGCGCCGCCGCCCCGCCGAACTGGCGCAGATCGCGGCGGCGCGT
GCGAAGGCGGTCGAATCGGACGGCTGGCGGCAGGCGTTCCGCTGGCCGGTGACGGGGCGATTGTCAGGCTTTTTCGGGGC
GCAGCGCATCTATCGGGGCAAGGCGGGCGCCTATCACAGCGGCACCGACATCGCAGTGCCCGCGGGAACGCCCTTCGTGG
CGCCGGCCGACGGGGTGGTCACGCTCGCCGCCGAGACGCCCTTCACGCTGGAGGGCCATCTGCTGATCGTCGATCACGGC
ATGGGGCTGTCGAGCGCCTTCCTCCATTGCCAGCGGCTCGACGTGAAGGTCGGCGATCGCGTCGTGCAGGGGCAAAGGCT
GGGCACCGTCGGCCGCACCGGGCGCGCGACGGGGCCGCACATGCACTGGGGGCTGACGTGGCGGGGCAAGCGGCTCGACC
CCGGCAAGCTCGCGGGACCGATCGGCGATTGA

Upstream 100 bases:

>100_bases
TCGGGCTCGACGAGCTTCGCTACTGGTCGGTGGCGCGGCAGGAAGCCTATGCGAGCGCGGCGATATCGGTGCAGGCGGAA
CTGGACGCCGCGCGCACGGC

Downstream 100 bases:

>100_bases
CCCCCGATCGCGGCGGCTGCGCCGTGAAATCGTAACCATTGAAACAATATGTCGCGAAATACGGCCGCGTGGCATCTTGT
GTGTCGCGGCTTTCGGCGGA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSLWTHWRRGAVVALLATAACVPVAERESRPAPPPAAPPVPAPPPPQRVRHDLVLTGAAEQGAVITGRASPGVRSLTLDG
APVPVARDGAFLLGFDRDAGTEAELVATFTDGQRIVRPITVAAGRWRIEHVDAPWRGGATSDADFARRRPAELAQIAAAR
AKAVESDGWRQAFRWPVTGRLSGFFGAQRIYRGKAGAYHSGTDIAVPAGTPFVAPADGVVTLAAETPFTLEGHLLIVDHG
MGLSSAFLHCQRLDVKVGDRVVQGQRLGTVGRTGRATGPHMHWGLTWRGKRLDPGKLAGPIGD

Sequences:

>Translated_303_residues
MSLWTHWRRGAVVALLATAACVPVAERESRPAPPPAAPPVPAPPPPQRVRHDLVLTGAAEQGAVITGRASPGVRSLTLDG
APVPVARDGAFLLGFDRDAGTEAELVATFTDGQRIVRPITVAAGRWRIEHVDAPWRGGATSDADFARRRPAELAQIAAAR
AKAVESDGWRQAFRWPVTGRLSGFFGAQRIYRGKAGAYHSGTDIAVPAGTPFVAPADGVVTLAAETPFTLEGHLLIVDHG
MGLSSAFLHCQRLDVKVGDRVVQGQRLGTVGRTGRATGPHMHWGLTWRGKRLDPGKLAGPIGD
>Mature_302_residues
SLWTHWRRGAVVALLATAACVPVAERESRPAPPPAAPPVPAPPPPQRVRHDLVLTGAAEQGAVITGRASPGVRSLTLDGA
PVPVARDGAFLLGFDRDAGTEAELVATFTDGQRIVRPITVAAGRWRIEHVDAPWRGGATSDADFARRRPAELAQIAAARA
KAVESDGWRQAFRWPVTGRLSGFFGAQRIYRGKAGAYHSGTDIAVPAGTPFVAPADGVVTLAAETPFTLEGHLLIVDHGM
GLSSAFLHCQRLDVKVGDRVVQGQRLGTVGRTGRATGPHMHWGLTWRGKRLDPGKLAGPIGD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=96, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32063; Mature: 31932

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLWTHWRRGAVVALLATAACVPVAERESRPAPPPAAPPVPAPPPPQRVRHDLVLTGAAE
CCCCHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCC
QGAVITGRASPGVRSLTLDGAPVPVARDGAFLLGFDRDAGTEAELVATFTDGQRIVRPIT
CCEEEEECCCCCEEEEEECCCCCCEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEE
VAAGRWRIEHVDAPWRGGATSDADFARRRPAELAQIAAARAKAVESDGWRQAFRWPVTGR
EECCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
LSGFFGAQRIYRGKAGAYHSGTDIAVPAGTPFVAPADGVVTLAAETPFTLEGHLLIVDHG
CHHHHHHHHHHCCCCCCEECCCCEEECCCCCCCCCCCCEEEEEECCCEEECCEEEEEECC
MGLSSAFLHCQRLDVKVGDRVVQGQRLGTVGRTGRATGPHMHWGLTWRGKRLDPGKLAGP
CCHHHHHHHHHCCCEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCC
IGD
CCC
>Mature Secondary Structure 
SLWTHWRRGAVVALLATAACVPVAERESRPAPPPAAPPVPAPPPPQRVRHDLVLTGAAE
CCCHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCC
QGAVITGRASPGVRSLTLDGAPVPVARDGAFLLGFDRDAGTEAELVATFTDGQRIVRPIT
CCEEEEECCCCCEEEEEECCCCCCEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEE
VAAGRWRIEHVDAPWRGGATSDADFARRRPAELAQIAAARAKAVESDGWRQAFRWPVTGR
EECCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
LSGFFGAQRIYRGKAGAYHSGTDIAVPAGTPFVAPADGVVTLAAETPFTLEGHLLIVDHG
CHHHHHHHHHHCCCCCCEECCCCEEECCCCCCCCCCCCEEEEEECCCEEECCEEEEEECC
MGLSSAFLHCQRLDVKVGDRVVQGQRLGTVGRTGRATGPHMHWGLTWRGKRLDPGKLAGP
CCHHHHHHHHHCCCEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCC
IGD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]