Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488582

Identifier: 103488582

GI number: 103488582

Start: 3254834

End: 3255046

Strand: Direct

Name: 103488582

Synonym: Sala_3106

Alternate gene names: NA

Gene position: 3254834-3255046 (Clockwise)

Preceding gene: 103488581

Following gene: 103488583

Centisome position: 97.3

GC content: 69.01

Gene sequence:

>213_bases
ATGTTGATCGCCAGCCGTAACCGCCTTGCCCGCCTCCACTATGGGCCGAACGGCTTTCGCGTGCTGGCGCCCGGCGACCA
TGTGCTGTGCGCGGTGACCGGCGTGCCGATCGGGCTCGACGAGCTTCGCTACTGGTCGGTGGCGCGGCAGGAAGCCTATG
CGAGCGCGGCGATATCGGTGCAGGCGGAACTGGACGCCGCGCGCACGGCATGA

Upstream 100 bases:

>100_bases
CGGGGCAGGGCGAGCTGTTCTGAGCGCGCAGGGGTGGCTCGCGCGGGCGATCCTGCTATAGTCGCCGCCAACCCTCCCCC
GCTCACCGGATATATGCGCC

Downstream 100 bases:

>100_bases
GCTTGTGGACGCACTGGCGCCGCGGTGCGGTCGTCGCGCTGTTGGCGACGGCGGCCTGCGTTCCCGTGGCGGAGCGCGAA
AGCCGTCCCGCGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLIASRNRLARLHYGPNGFRVLAPGDHVLCAVTGVPIGLDELRYWSVARQEAYASAAISVQAELDAARTA

Sequences:

>Translated_70_residues
MLIASRNRLARLHYGPNGFRVLAPGDHVLCAVTGVPIGLDELRYWSVARQEAYASAAISVQAELDAARTA
>Mature_70_residues
MLIASRNRLARLHYGPNGFRVLAPGDHVLCAVTGVPIGLDELRYWSVARQEAYASAAISVQAELDAARTA

Specific function: Unknown

COG id: COG3908

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7551; Mature: 7551

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIASRNRLARLHYGPNGFRVLAPGDHVLCAVTGVPIGLDELRYWSVARQEAYASAAISV
CEEECCCCEEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEE
QAELDAARTA
EECCCCCCCC
>Mature Secondary Structure
MLIASRNRLARLHYGPNGFRVLAPGDHVLCAVTGVPIGLDELRYWSVARQEAYASAAISV
CEEECCCCEEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEE
QAELDAARTA
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA